KEGG   Arabidopsis thaliana (thale cress): AT5G47080
Entry
AT5G47080         CDS       T00041                                 
Symbol
CKB1
Name
(RefSeq) casein kinase II beta chain 1
  KO
K03115  casein kinase II subunit beta
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03008  Ribosome biogenesis in eukaryotes
ath03083  Polycomb repressive complex
ath04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AT5G47080 (CKB1)
  09126 Chromosome
   03083 Polycomb repressive complex
    AT5G47080 (CKB1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    AT5G47080 (CKB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT5G47080 (CKB1)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT5G47080 (CKB1)
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  90S particles
   Kinase
    AT5G47080 (CKB1)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     AT5G47080 (CKB1)
SSDB
Motif
Pfam: CK_II_beta
Other DBs
NCBI-GeneID: 834754
NCBI-ProteinID: NP_199519
TAIR: AT5G47080
UniProt: P40228 A0A5S9YCV4
Position
5:complement(19124563..19126694)
AA seq 287 aa
MYRDRGTVNSRPEVVDRKRINDALERPSPSTSRQVNGKGKGTVTAATTTANLIGKQQSNN
INHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDD
YIQDDFNLCGLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLYGLIHARYI
LTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDLPRSSTVKIYCPKCEDIYYPRS
KYQGNIDGAYFGTTFPHLFLMTYGHLKPAKATQNYVQRVFGFKLHKP
NT seq 864 nt   +upstreamnt  +downstreamnt
atgtatagagacagaggaacggtgaattcgagacctgaagttgtggatcgtaaacggatc
aacgacgctcttgaacgtccttctccttcaacctctcgtcaagttaacggcaaaggcaaa
ggaaccgttacggcggcgacgacgacggcgaacttgattgggaagcagcagtcgaataac
atcaaccatagagattctcgttctgcttctctctcgaagaacaatacggtttctgatgat
gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca
tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat
tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac
gctcttgatttgattttggatgttgaatcttctcaaggagagatgtttacagaggaacag
aatgaattgatcgagtcagcagctgagatgttgtatggactgattcatgctcgttacata
ttgactagcaaaggattggcagcaatgttagacaaatacaaaaactatgactttggaaga
tgtccaagagtttattgctgtggccaaccttgtcttccggttggtcaatcagacttaccg
cgatctagcactgtgaagatatattgcccgaaatgcgaagacatttattacccacgatca
aagtatcaaggcaacattgatggagcttactttgggacaacgtttccacatctgttcctg
atgacttatgggcatctcaagccagcgaaggcaacacaaaactatgttcaaagagtgttt
gggttcaaattacacaaaccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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