KEGG   Agrobacterium fabrum: Atu1562
Entry
Atu1562           CDS       T00070                                 
Symbol
secD
Name
(GenBank) protein-export membrane protein SECD
  KO
K12257  SecD/SecF fusion protein
Organism
atu  Agrobacterium fabrum
Pathway
atu02024  Quorum sensing
atu03060  Protein export
atu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Atu1562 (secD)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Atu1562 (secD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Atu1562 (secD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:atu02044]
    Atu1562 (secD)
Secretion system [BR:atu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Atu1562 (secD)
SSDB
Motif
Pfam: SecD_SecF SecD_1st Sec_GG ACR_tran SecD-TM1 MMPL Sterol-sensing FLgD_tudor RE_XcyI
Other DBs
NCBI-ProteinID: AAK87347
UniProt: Q7CYZ3
Position
circular:complement(1548369..1550942)
AA seq 857 aa
MLHFSRWKTVFIWLLVLASVFIASPNLFSEKQLESMPAWYKDNKVTLGLDLQGGSHIMLK
IERSDIVKERLETIVGDVRTQLRDANIRYSGLTGNGQQIQVRISDPAQMEAAKTALRDLT
QPVSAGTLVGGSITEVTMNDGGDSLLRLNLTDEGIDYRLSSAVSQSIEVVRRRVDEVGTT
EPLIQRQGSDRIIVQVPGLQDPQRLKSLLNQTAKLSFRMVDTTMPAQDAMNGRPPATSEV
LYSQDDPPVPYLVERRALVSGDNLVDAQASFNQQTNEPVVTFRFDSRGAQRFAQATQQNV
GKPFAIVLDNQVISAPVIREPIIGGSGQISGSFSVQGANDLAVLLRAGALPATLTVVEER
TVGPSLGNDSITAGLTASAIGAVGVLIFMFVFYGFFGLLANIALIVNVVMLIAVLSVIGS
TLTLPGIAGIVLTIGMAVDSNVLIYERIREEVKSGKPLIQALDNGFTRAFATIIDANLTT
LIVASVLFYMGTGPVKGFAVTLAVGIITTVFTAYTLTAWMFGYWVRRSRPKHLPKGVRTA
MFDGRDIPFMRYRRVVFMITGVIMLACVGGFVAKGLNLGIDFQGGSVIEVRAKQGEADLA
DIRERLNQLNLGEIQAQNFGSPQDVLIRIQAQDGGENAEQSAITLVRGELEDKYDFRRVE
VVGPAVSGDLTVTSTIGVLLAMAAIMVYIWVRFEWQFALGAVISMVHDVVFTIGLFVFLG
IEFNLTSIAAILTIIGYSLNDTVVIYDRVRENLRRYKKMPLSMIIDVSLNQTLSRTILTG
LTVLLALLALYLFGGEVIRSFTFAMLFGVGIGVFSSVYIAAPVLIAFKLRPDSKDAEDEK
DDKKENNTGAIGGKPAV
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgcttcatttttcccgttggaaaacagtcttcatctggctgcttgtgctggcaagcgtc
ttcatcgcctctcccaacctgttttcggaaaaacagctggagagcatgcctgcctggtac
aaggacaacaaggtaacgctcggtctcgaccttcagggcggctcgcacatcatgctcaag
atcgagcgttccgacatcgtcaaggaacggcttgagacgatcgtcggcgatgtgcgcaca
cagcttcgcgacgccaacatccgctattcggggctcaccggtaacggccagcaaattcag
gttcgcatcagcgatcccgcgcagatggaagccgccaagaccgcacttcgtgatctgacg
cagccggtgtctgccggaacgctggtcggcggttccattacagaagtgacgatgaatgac
ggcggcgacagtctgctgcgcctcaacctgacggatgagggcatcgattaccgtctgtca
tcggccgtttcgcagtcgatcgaagtcgtgcgccgccgcgttgacgaagtcggcacgacc
gagccgctcatccagcggcagggttccgaccgcatcatcgtgcaggtgccgggtcttcag
gatccgcagcgcctgaaatcgctcctcaaccagactgcaaagctgtccttccgcatggta
gacacgaccatgccggcgcaggacgccatgaacggccgtccgcccgcaacctcggaagtt
ctctactcgcaggacgatccgccggttccctatctggtggagcgtcgcgcactcgtgtcc
ggcgacaatctcgtcgatgcacaggcaagcttcaaccagcagaccaacgaacccgtcgtc
accttccgcttcgacagccgcggcgcgcagcgctttgcgcaggcgacacagcagaatgtc
ggcaagcctttcgccattgtgctcgacaatcaggttatttccgcgcctgtcatccgcgag
cccatcatcggcggttcgggacagatttccggtagtttctcggtgcagggtgcgaatgat
ctcgcggttctgctgcgagccggtgcactgccggccacgctaacggtcgttgaagaacgc
accgtcggtccgagcctcggtaacgactccatcaccgcgggccttacggccagcgccatc
ggcgccgttggcgtcctcatcttcatgttcgtcttctacggcttcttcggcctgctggcg
aatatcgcgcttatcgtcaacgtcgtaatgttgatcgcggtgttgagcgtcatcgggtca
acgctcaccttgcccggtatcgccggtatcgtcttgacgatcggtatggcggtggattcc
aacgttctgatctatgagcgaatacgcgaagaggtgaagagcggcaaaccgctgatccag
gcgctggataatggttttacacgcgcctttgcgaccatcatcgacgccaacctgacgacg
ctgatcgtggcgagcgtgctgttctacatgggcactggtccggtcaagggcttcgccgtc
acgcttgcggtcggtatcattaccaccgtgttcacggcctatacgctgacggcctggatg
ttcggctactgggttcgccgcagccgtccgaaacatctgccgaagggtgtacgcacggcc
atgttcgatggtcgcgatattcccttcatgcgttatcgccgcgtggttttcatgatcacc
ggtgtgatcatgctcgcctgcgtcggcggtttcgtcgccaagggtctgaacctcggcatc
gatttccagggtggctcggtcatcgaagtgcgcgccaagcagggtgaggcagatcttgct
gacatccgcgagcgtctgaaccagctcaacctcggtgaaatccaggctcagaacttcggc
tcgccgcaggatgtgctcatccgcattcaggcgcaggacggcggcgaaaatgccgagcag
tcggccatcacgctggttcgcggcgaacttgaggacaaatacgacttccgtcgcgtggaa
gtcgttggtccggccgtctccggtgacctgaccgttacttccacgatcggtgtcctgctc
gccatggcggcgatcatggtctacatctgggttcgcttcgagtggcagtttgcactcggt
gcggtcatctcgatggtgcatgacgtggtcttcaccatcggccttttcgtcttcctgggt
atagagttcaacctgaccagtatcgcggcgatcctgacgatcatcggttattcgctgaac
gacactgtcgtcatctacgaccgtgtccgtgaaaacctccggcgatacaagaagatgccg
ctttcgatgatcatcgacgtatcgctgaaccagaccctgtcgcgcacgatccttaccggc
ctgaccgtgcttctggcactgctggcactgtatctcttcggtggcgaggtcatccgttcc
ttcaccttcgccatgttgttcggcgtcggtatcggcgtgttctcctcggtctatatcgcg
gctccggtgctgatcgccttcaagctgcgtcctgacagcaaggatgcggaagacgaaaag
gacgacaagaaagaaaacaacaccggcgccattggcggcaagcctgccgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (43)   

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