KEGG   Trichormus variabilis: Ava_2420
Entry
Ava_2420          CDS       T00277                                 
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
Organism
ava  Trichormus variabilis
SSDB
Motif
Pfam: PAS_9 PAS PAS_3 PAS_4 Response_reg HATPase_c PAS_8 HisKA PAS_11 FAM194
Other DBs
NCBI-ProteinID: ABA22037
CyanoBase: Ava_2420
UniProt: Q3MAE9
Position
complement(3006101..3008902)
AA seq 933 aa
MSELLYTFFITITAIIFLYTAFVCVKLIAKAGKFPSNVQLEATNQKLQQAILNSANYTII
STTPDGIILTFNAAAQRWLGYTAEEVIGKTTPEIVHDKNEVVKVAQELSQELGVTIEPGF
EVFVAKARLGQVEEREWTYIRKDGSRFPVLLSVTPLYDAEENITGFLGIGSDITARKLAE
AALRESEYRYATLAQTAPVGIFRNDASGRCIFANERACNLIGSPLEDILGEGWVQSLHPD
DRLRIVREWNQAIKQNLPFKAEYRFRHPNNVINWVISQAIPERGSDGEVTGYIGTMTDIN
DRKRAEEELLHLSQALESAVEGISQLDTQGHYIKVNPAYAQITGYTPEEMIGMEWTSTVH
PDDQEKMMAAYRQMLKNGKVEMEARAMRKDGSAFYKQVVMVKAYNQQQECIGHYCFMKDI
SDRREVERLKDEFVSVVSHELRTPLTSISGALDLLASKVVPAGSEDAQRMLNIAANNTDR
LVRLINDILDIERIESGKIQITPQACNAADLMTQSVEVMEELAEQGGIQLAMSPLSAHLW
ADPDRIIQVFTNLISNAIKFSPAGATVWVTAKIPEKSELEKFPNPVILFEVKDQGRGIPA
DKLESIFERFGQVDASDSRQKGGTGLGLAICRSILQHHGGRIWAESTLGEGSTFFFTLPI
FPEEQNQEEEFLHRPHTTPQHPKNSTSPLILHCDDDFSVRAVMQVILEKQGYQVMTVASG
KEAVEKAKFNQPDAIILNLMMPDIDGWETLALLKQQPETQNVPVIILSGVTPDHNKELSH
DVSDWIIKPPDVKLLCRALEKATTKQQAIKVLVVEDDPDLAQVLIAMFNRHGISTFYAQK
GREAIQISQNIIPDLLVLDLGLPEWDGFAVVDWLRQHQHLYHVPLVVYTARDLDESDRQR
LKLGETLFLTKGRINPQEFEQRVITLLNRIICN
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgtccgaattactatatacattttttataacgattacagccattatttttctgtacaca
gcctttgtctgtgtaaaactaattgcaaaagctgggaaatttcctagcaacgtacagtta
gaagcaacaaatcaaaaattgcaacaggcaattttaaacagtgccaattacacaattatt
tccaccacaccagacggcataattctgacatttaatgcggctgcacaacgatggctggga
tataccgccgaagaagtgattggtaaaacaaccccagaaattgtccacgataaaaatgaa
gtcgtgaaagtggcacaagaactatctcaagagttaggggtaaccattgaacctggattt
gaggtttttgtggctaaagcacgactgggacaggtggaagaacgggaatggacttacatt
cgtaaagatggttcgcgtttcccagtgctgctatctgttacacctttgtatgatgcagaa
gaaaatattaccggttttctgggtattggtagtgatattactgctcgcaaattggcagaa
gcagctttacgagaaagtgaatatcgttatgccaccctggcacaaaccgcaccagtaggc
atttttcgtaatgatgcttctgggcggtgcatttttgctaatgaaagagcttgcaattta
attggttcacccctcgaagacatcttgggtgaaggctgggtacaatccctgcatccagac
gatcgcctgcgtattgtgagggaatggaatcaagccataaagcaaaatttaccgtttaaa
gcagagtatcgttttcgccatcccaataacgtcattaactgggtaatctcccaagcaatc
cccgaaagaggaagtgatggagaggtgacaggatacatcggcacaatgacggacattaac
gatcgcaaacgagccgaagaagaactgcttcacctcagccaagccttggaaagcgctgtg
gaaggtatctctcagttagatactcagggacattacattaaagtaaatccagcctacgcc
cagataactggctacacaccagaagagatgattggcatggagtggacatcaactgttcat
ccagatgaccaagaaaaaatgatggctgcctatcgccaaatgctgaaaaatggcaaggta
gaaatggaagctagagccatgcgtaaagatggttcagctttttataaacaagtagtaatg
gtgaaagcctataaccaacagcaggaatgtatcggccattattgctttatgaaggatatt
agtgatcgccgtgaagtcgaacgcctcaaagatgaatttgtctctgtcgtcagtcacgaa
ttacgcacccctttaacttccatttctggcgctttagacttattagctagcaaagtcgtg
ccggcaggttctgaagatgcccaacggatgctcaacattgccgctaataatactgataga
ttggtgcgtctgatcaatgacatcctagatattgaacgcattgagtcgggaaaaatccaa
attactccccaagcttgcaatgctgccgacttaatgacccaatcagtagaagtgatggag
gaattagcagagcaagggggaatacaattagcaatgtcacctttatcagctcacctttgg
gcagatcccgatcgcatcatccaagtatttaccaacctcatcagcaatgccattaaattc
tcccctgctggggctacagtttgggtgactgctaaaattcccgaaaaaagtgagctagaa
aaattccctaaccctgtgatcctgtttgaagtcaaagaccaaggtcggggtattccggct
gataaattggaatctatctttgagcgttttgggcaagttgatgcctccgactcccgtcaa
aaaggtggcacaggtttgggcttggctatctgtcgcagcattttgcagcatcatggagga
cgaatctgggctgaaagcaccttgggcgagggtagcaccttcttttttaccttgccaatt
tttccagaagagcagaatcaagaagaagagtttctacatcgcccccacaccacacctcag
caccccaaaaactcaacctctcctctgatactccattgcgatgatgatttttccgtgcga
gctgttatgcaagtcatcctcgaaaagcaaggttatcaagtcatgaccgtggcatcagga
aaagaagctgtagaaaaggcgaaattcaaccaacctgatgcaattattctcaatctcatg
atgccagatatagatggttgggaaacattagcactgctcaaacagcagccagaaactcaa
aacgttcccgtaattattcttagtggtgtaacacctgaccataataaagaactttcccac
gatgttagtgattggattatcaaacctcccgatgtgaagttgttatgccgagctttagaa
aaagctaccaccaagcaacaagccatcaaagtactagttgtggaagatgacccagattta
gcacaagtattgattgctatgttcaatcgtcacggcatttctaccttctatgcccaaaaa
ggacgggaagccattcaaattagtcaaaatatcattcccgacttgttggtactagatttg
ggattacccgaatgggatggttttgccgtggtggactggttgcggcagcatcagcatttg
tatcatgtacctttagtagtttacacagcccgcgatttagatgagagcgatcgccaaaga
ttaaaattaggggaaacattatttctcactaaaggacgcattaacccccaagaatttgag
cagcgtgtcattaccttactcaacagaataatttgcaattag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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