KEGG   Trichormus variabilis: Ava_2845
Entry
Ava_2845          CDS       T00277                                 
Name
(GenBank) Serine/Threonine protein kinase and Signal Transduction Histidine Kinase (STHK) with GAF and PAS/PAC sensor
Organism
ava  Trichormus variabilis
SSDB
Motif
Pfam: AAA_16 Pkinase PK_Tyr_Ser-Thr HATPase_c GAF PAS_3 GAF_3 GAF_2 ABC1 Pkinase_fungal HATPase_c_5 HisKA PAS_9 AAA_22 Kinase-like Sigma54_activat DUF3369 PAS nSTAND1 HATPase_c_3 Choline_kinase APH NACHT
Other DBs
NCBI-ProteinID: ABA22458
CyanoBase: Ava_2845
UniProt: Q3M978
Position
complement(3525203..3531007)
AA seq 1934 aa
MIATQVSIPGYIVHEQLYDGSRTFVYRSVKETDNKPVVIKLLKNHYPSFSELVQFRNQYT
IAKNLNYPGIIRTYSLESFQNGYILVMEDFGGISLKDYFFKNYVSSLDEFLQIAIALCNT
LDILYKERIIHKDIKPSNILINPETKQVKLIDFSIASLLPRETQTLVNPNVLEGTLAYIS
PEQTGRMNRGIDYRTDFYSLGVTFYELLTRELPFPANEPMEVVHCHIAKTAPLAHEVNPQ
IPPILSAIVSKLMAKNVEDRYQSALGLKYDLENCLSQLQATGKIESFKIAQRDVCDRFII
PDKLYGREAQIEMLLQAFDRVSLGATEMMLVAGFSGIGKTAVVNEVHKPIVRQRGYFIKG
KFEQFQRNIPFSAFVQAFRNLIGKLLTESNSQIQQWKVQILEALGENGQVIIDVIPELEL
IIGQQPPTKDLSGSAAQNRFNLLFQKFTHVFTSKEHPLVIFLDDLQWADLASLNLMQILI
ADTEYLLLIGAYRDNEVSPSHPLMFTLGEIKKLPSIINTITLTPLSQIRINQLVADTLKC
TEALAWNLSQLVYQKTQGNPFFSTQFLKALHQENLIQFNFFEGYWQCDITAINQQSLTSD
VVEFMVFQLQRLSASTQDVLKLAACIGNYFDLSILAIVSGQTEVEIATDLWQALQEGLIL
PTSNIYKFYQQDTLLDHQRITNDNGKRVFTYKFLHDRVQQAAYSLIPNNQKAVTHLKIGE
LLRQNLSQIEQEEKLFDIVGHLNRGQELITQLSEREALAKLNLQAGVKARNSTAYAAATE
YLQLGIELLQTNCWQTQYELALNLHIAAVEVAYLNGDFEEMEKIAAMVLRSAQTILDKVK
IYTIQIAAQTTQSQMLEAIAIGTDALSQLGVEFPREPDEAEIAKVLQAITNQLQSRQIGE
LVDLPVMTDPTSVAAMQLLGRLFSPIFVGIPGLLPILSAKMVSLSLQFGNTPTSTVGYAI
HGLVMCAVLQEVETGYSFGKLALSLLERFNLPEYKSMTLHLFGDFIQHHRETLQATKLTL
KDSYRIGMDTGDFLRAGYSIVGYSQVRLFSGVELDICESELATYSAALAQVKQFSPQVYL
NLTWQTVKNLREPVNQPDCLIGSAYDETQMFPKHFQDRELTAISTAYIAKLMLAYLWGNY
SPAISYIKQIKLYLMAVSGLICVPIFHFYAALTYLAIFRTQSKPEQAEILAQIATHQTRL
HHSAQNAPMNHLHKWYLVEAEKQRVLGYYYEAGDRYDRAIAGAKANGYIQEEGLANELAA
KFYLDWGREKAAIWYLQEAYYCYAKWGAKAKVADLERRYPQLLAPILQQSRSTLSTNETI
FTVGTVTKSSSSVSSSSSNVSDTLDLTAILKASQAISGEIELEKLLSSLLRIIIENAGAD
KCVLMLLQDNHLLIQGSITQGYKPIMLPSLPVEDSLEIPHKLIYKVKHSQHTVVLLDATA
DTTLANDPYIIRQKPLSILCSPILYQGKLLGILYLENNLVRGAFTSDRVQLLNLLCTQVA
ISLENAQLYQRSQENAQQLERSLEKLRLSEARFQKLANNVPGIIYQIRIKADGSASIPYV
SSGCQTLYEIAAEDFMSGKYSLRDFEHPDDRAKAFQIVVESAKNLTPFQHEWRIITPNGN
IKWVKAASQPERGEDGEIVWDGILIEISDLKQAELDLQQAQLQIIQSEKMSALGNLVAGV
AHEMNNPLGFIAASLKQAKPTFADILEHLKIYQETLPDKTEEILDHESEIDLEYTIEDLP
KMLDSMTIACDRLKNISTSLRTFSRADRDYKVPFNLHEGIDSTILILKHRLKSNEQRPAI
EVITNYGNLPQLECFPGQLNQVFMNILVNAIDALDESNHGRNFEEIKSHPNQITITTSIA
DKSVKISIADNGKGMSEEVKHKIFDHLFTTKGVGKGTGLGLAIAKQIVVESHGGQLKCNS
ALGEGTEFIIEIPV
NT seq 5805 nt   +upstreamnt  +downstreamnt
atgattgctactcaagtcagtattcctggatatatagttcatgaacaactctatgatggt
tctagaacttttgtctaccgatctgtaaaagaaactgataacaaacccgtagttatcaaa
ctgttgaaaaatcattatcccagctttagcgaactagtacaattccgcaaccagtatact
attgctaaaaatcttaactatcctggaatcatccgaacctatagcctggaatcgttccaa
aatggttatatcttggtaatggaagactttgggggaatttccctcaaggactattttttt
aagaattatgtttcgtcacttgatgagtttttacaaatagcgatcgccctctgtaacacc
ttagatatactctacaaagagcgcattattcataaagatattaaacccagcaatatatta
attaaccctgaaactaagcaagttaaattaatcgactttagtattgcatctttactacca
agagaaacccaaactttggttaaccccaatgttttagaaggaacactagcttatatatct
cccgaacaaaccgggagaatgaatcgcggaattgattaccggacagatttctactctctg
ggtgtaactttttatgaattactcacaagagagttaccttttccagctaatgaaccgatg
gaagtagtacattgtcatattgccaaaacagcaccattagcgcatgaagttaatccccaa
atcccaccaatattatcagcaattgtcagcaaattgatggcaaaaaatgtcgaagaccgc
tatcaaagtgcattgggattaaaatatgatttagaaaattgtttgtctcaactccaagca
actggcaaaattgagagttttaaaattgcccagagggatgtgtgcgatcgcttcatcatt
cctgataaactttatggtagagaagcccaaatagaaatgttgctacaagcctttgataga
gtcagtcttggtgcaacagaaatgatgctggtggctggcttttcaggaattggtaaaacg
gcagttgtcaatgaagtgcataaaccgattgttagacaacgtggttattttattaaaggt
aaatttgagcaatttcaacgcaatattcccttctcggcctttgtccaagcgtttcgtaat
ttaataggtaaattattaacagaaagcaatagccaaattcagcaatggaaagttcagatt
ttagaggcattgggtgaaaatggacaggtaattattgacgttattcccgaactagaactc
attattggtcaacaaccacccacaaaagacttatcaggtagcgcagcccaaaatcgcttt
aatttattattccagaagttcactcacgtttttactagtaaagagcatccattagtaata
tttttagatgatttacaatgggcggatttggcatcattaaacttaatgcaaatcttaatt
gctgatacagaatatctactattaataggtgcatatcgtgataacgaagtcagcccatca
catccattaatgtttaccttgggtgaaattaaaaaattaccatcaataattaatacaatt
accttaacaccactgagtcaaatacgcatcaatcaattagtggctgacacactcaaatgt
acagaagctttagcctggaatctttcacaactggtatatcaaaaaactcaaggtaatcca
ttttttagtacacagtttctcaaagcattacatcaggaaaatctgattcaattcaacttc
tttgagggatattggcaatgtgatattacggcaatcaaccagcaatcacttacttcagat
gtagttgaatttatggtatttcaattacagagattatctgcatcaactcaagatgtgctg
aaattagctgcttgtattggtaactattttgatttatcaattttagcaattgtttccggt
cagacggaggtagaaattgctactgatttgtggcaagcattacaggaaggtttgatccta
ccaactagtaatatttataagttttatcaacaagatacattattagatcatcaacgcata
actaatgataatggcaaaagagtattcacttataaattcttacacgaccgagtccaacaa
gcagcttattctctcatccctaataatcaaaaagcagtaactcatctaaaaattggagaa
ttactacggcaaaatttatctcaaatagagcaagaggaaaaactatttgatattgtcgga
cacttgaaccgaggacaagagctaattactcaactaagtgaacgggaagcattagctaaa
ctcaacttacaagcgggagttaaagcgagaaattccacagcttatgccgccgcaacggag
tatttacaactaggcattgagttgctacaaacaaactgctggcaaactcagtatgaatta
gctctcaacctccatattgcggctgttgaagttgcctatctcaatggtgactttgaggag
atggaaaagatagcagcaatggtgttgcgatccgctcagacaattttagacaaagtgaaa
atttacacaattcaaatcgcggcacaaacaacccagagccagatgttagaggcgattgcc
ataggaacagatgcactttcccaattaggagtagaatttcctcgtgaacccgatgaagct
gaaattgccaaggttctacaagctattacgaatcaactccagagcagacagattggggaa
ctagttgatctaccagtcatgaccgatcctacatcagtggcagcaatgcaactattagga
aggttattttcacccattttcgtgggaataccaggtttattacctattctgagcgcaaag
atggtgagtttgtcactccagttcggaaatacaccaacatcgacggtggggtatgcaatt
catggactggtgatgtgtgctgttttgcaagaagtggaaacaggctacagttttggtaaa
ttagccctctcattgctggagcgtttcaatttaccagagtataaatccatgactctacat
ctgtttggggattttattcagcatcatcgggaaactttgcaggcaacaaaattaacactg
aaagatagctataggattggtatggatactggtgattttctccgtgctggctacagcatt
gtgggttatagccaggtaagattatttagtggggtggaattagatatttgcgaatctgag
ttagcaacttacagcgccgccttggctcaggttaaacaattttctccgcaagtttattta
aacctaacttggcagacagtcaaaaatttgcgggaacctgtcaatcaaccagattgctta
attggtagtgcttatgatgaaacacagatgtttcctaagcattttcaggatcgtgaactg
acggctatctctacggcttacatagccaaactgatgctagcttacttatggggaaattac
tcgcctgcaataagctacattaaacaaatcaagctgtatttaatggcagtatcgggatta
atttgtgttccgatttttcacttttacgcagccctgacatatctcgctatcttccgcaca
cagtcaaagccagagcaggctgaaatcctcgcccaaatcgcaacccatcaaactcgtctg
catcattctgcacaaaatgcccctatgaatcatttacataaatggtatttagttgaggca
gaaaaacaacgggttttaggatattactatgaagcgggagacaggtacgatcgcgctatt
gctggcgctaaagcaaatggctatatccaagaagaaggtttagccaacgaattagcagca
aaattttacctggattggggtagagaaaaagctgccatttggtatttgcaagaagcctat
tattgttatgctaaatggggagcaaaagcgaaagtcgccgatttagaaagacgctatccg
cagttacttgcccccatattacagcaaagccgttcgaccctttccaccaacgaaactatc
ttcaccgtggggactgtcacaaaaagtagttcttcagtctctagcagtagcagtaatgtc
tcagataccctagatttaacagcaattctcaaagcatctcaagcgatctctggagaaatc
gaactagaaaaactgctttcgtctttactgagaatcatcatcgaaaatgctggggctgat
aaatgtgtgttaatgctgttgcaagacaatcatttattaattcaaggttcaattacccag
ggttataagccaattatgttaccaagtcttcccgttgaagacagcctggaaattcctcac
aaactcatttacaaagtcaagcatagtcaacacactgttgttttgttggatgcaaccgca
gataccaccttagccaatgacccatacatcatccgtcaaaagcctttgagtattttgtgc
agcccgattttgtatcaaggtaaattgctggggattttatatctagaaaataatttagtg
agaggggcatttacgagcgatcgcgtgcaactattgaatttactttgcacacaagttgcc
atttctctagaaaatgcccaactttatcaacgttctcaggaaaatgcccaacagttagag
cgatcgctggaaaaattacggctcagtgaagcccgctttcaaaaactggcaaataatgtt
cctggaataatttatcagatccggattaaggctgatggttcagcttctataccttacgtt
agttctgggtgtcaaacactttatgaaatagcagcagaagatttcatgtcagggaaatac
agcttgcgcgattttgaacatcctgacgaccgagcaaaggcgtttcaaatagttgtcgag
tcagcgaaaaatctcaccccttttcagcatgaatggcgcattattacacctaatggaaat
atcaagtgggtaaaggctgcatcccagccagaacgtggtgaggatggtgaaattgtatgg
gatggcattttgattgaaattagcgatctcaaacaagctgaactggatttgcaacaagcc
caattacaaatcattcaaagtgagaaaatgtccgccttgggtaacttggtggctggtgtc
gcccacgaaatgaataatcctttgggctttattgctgccagtctcaagcaagctaaacct
acctttgccgatattctcgaacatttgaaaatctatcaagaaactttacccgataaaacc
gaagaaattctcgatcacgagtcggaaattgatttggaatacaccatagaagacctgcca
aaaatgctggattctatgacaatagcttgtgataggttaaaaaatattagcacttcccta
cgcactttctcccgtgctgatagagactacaaagtaccatttaatcttcacgaaggtatt
gacagcacaatcttaattctcaaacatcgtctcaaatctaacgaacaacgtcccgcaatc
gaggtaataactaactacgggaatttaccacaattagaatgttttcctgggcaattaaat
caggtatttatgaatattttagttaatgcaattgacgcattagatgaatcgaatcacgga
cggaattttgaggagattaaatctcatcctaaccagatcacaattactacatcaatagca
gataaatctgtgaaaatctccattgctgataatggtaaaggtatgagcgaagaagttaaa
cacaaaatatttgaccatttatttactaccaaaggtgtaggtaaaggtacaggtttaggg
ttggctatagctaaacaaattgttgtggaaagccacggtggccagttgaaatgtaactcg
gctttaggagaaggtacggaatttatcatagaaatacccgtgtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (55)   

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