KEGG   Trichormus variabilis: Ava_3905
Entry
Ava_3905          CDS       T00277                                 
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
  KO
K01602  ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
Organism
ava  Trichormus variabilis
Pathway
ava00630  Glyoxylate and dicarboxylate metabolism
ava00710  Carbon fixation in photosynthetic organisms
ava01100  Metabolic pathways
ava01110  Biosynthesis of secondary metabolites
ava01120  Microbial metabolism in diverse environments
ava01200  Carbon metabolism
Module
ava_M00165  Reductive pentose phosphate cycle (Calvin cycle)
ava_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ava00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Ava_3905
  09102 Energy metabolism
   00710 Carbon fixation in photosynthetic organisms
    Ava_3905
Enzymes [BR:ava01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.39  ribulose-bisphosphate carboxylase
     Ava_3905
SSDB
Motif
Pfam: RuBisCO_small Guanylate_cyc_2
Other DBs
NCBI-ProteinID: ABA23510
CyanoBase: Ava_3905
UniProt: Q3M676
Position
complement(4856590..4856919)
AA seq 109 aa
MQTLPKERRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEASEPTEFYWTLWKLPL
FGAKTSREVLGEVQACRSQYPGHYIRVVGFDNIKQCQVLSFIVHKPSRY
NT seq 330 nt   +upstreamnt  +downstreamnt
atgcaaaccttaccaaaagagcgtcgttacgaaaccctttcttacttaccccccctcacc
gacgttcaaatcgaaaagcaagtccagtacattttgagccaaggctacattccagccgtt
gagttcaacgaagcttctgaacctaccgaattttactggacactgtggaagctacctttg
ttcggcgctaaaacatctcgtgaagttttgggtgaagttcaagcttgccgttctcaatat
cctggtcactacatccgtgttgtaggatttgacaacatcaagcagtgccaagtcctcagc
ttcatcgttcacaaacccagcagatactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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