KEGG   Trichormus variabilis: Ava_3907
Entry
Ava_3907          CDS       T00277                                 
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
  KO
K01601  ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Organism
ava  Trichormus variabilis
Pathway
ava00630  Glyoxylate and dicarboxylate metabolism
ava00710  Carbon fixation in photosynthetic organisms
ava01100  Metabolic pathways
ava01110  Biosynthesis of secondary metabolites
ava01120  Microbial metabolism in diverse environments
ava01200  Carbon metabolism
Module
ava_M00165  Reductive pentose phosphate cycle (Calvin cycle)
ava_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ava00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Ava_3907
  09102 Energy metabolism
   00710 Carbon fixation in photosynthetic organisms
    Ava_3907
Enzymes [BR:ava01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.39  ribulose-bisphosphate carboxylase
     Ava_3907
SSDB
Motif
Pfam: RuBisCO_large RuBisCO_large_N
Other DBs
NCBI-ProteinID: ABA23512
CyanoBase: Ava_3907
UniProt: Q3M674
Position
complement(4857469..4858899)
AA seq 476 aa
MSYAQTKTQTKSGYKAGVQDYRLTYYTPDYTPKDTDILAAFRVTPQPGVPFEEAAAAVAA
ESSTGTWTTVWTDLLTDLDRYKGRCYDIEPVPGEDNQFIAYIAYPLDLFEEGSITNVLTS
IVGNVFGFKALRALRLEDIRFPVAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLG
LSAKNYGRAVYECLRGGLDFTKDDENINSAPFQRWRDRFLFVSDAISKAQAETGEIKGHY
LNVTAPTCEEMLKRAEYAKELNQPIIMHDYLTAGFTANTTLARWCRDNGVLLHIHRAMHA
VIDRQKNHGIHFRVLAKALRLSGGDHIHTGTVVGKLEGERGITMGFVDLLRENYVEQDKS
RGIYFTQDWASLPGVMAVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATA
NRVALEACVQARNEGRNLAREGNDVIREAAKWSPELAVACELWKEIKFEFEAMDTV
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcttacgctcaaacgaagactcagacaaaatctgggtataaagccggggttcaagat
tacagactaacttattacacacctgattacacacctaaagatacagatattctggcggcg
ttccgtgttacaccccagcccggagttccctttgaggaagcggctgcggctgtagcggct
gagtcttctactggtacttggacgaccgtatggacagacctgttaaccgatctagatcgt
tacaaaggtcgttgctacgatatcgaaccagtacctggcgaagacaaccaattcattgcc
tacatcgcttatcctttggatctgtttgaagaaggctccatcaccaacgttttaacctca
attgtaggtaacgtatttggttttaaagcattacgcgcattgcgtttggaagacattcgc
tttcctgttgcttacatcaaaactttccaaggccctcctcacggtatccaagttgagcgt
gacaaattaaacaaatatggtcgtcctttgttgggttgtaccatcaaaccaaaattaggt
ctgtctgctaagaactacggacgcgctgtatacgagtgtttgcgcggtggtttggacttc
accaaagacgacgaaaacatcaactctgcaccattccaaagatggcgcgatcgcttcctg
tttgtgtctgatgctatcagcaaagcacaagcagaaacaggcgaaatcaaaggtcactac
ctcaacgtgacagctcctacctgtgaagaaatgttgaagcgggctgagtacgctaaagaa
ctcaatcagcccatcatcatgcacgactacctaacagcaggtttcaccgctaacaccacc
ttggctcgttggtgtcgtgacaacggcgttctactgcacatccaccgcgcgatgcacgca
gtaatcgaccgtcaaaagaaccacggtatccacttccgtgtattagctaaagccctacgt
ctatctggtggtgaccacatccacaccggtaccgtagtaggtaaattggaaggtgaacgc
ggtatcacaatgggcttcgttgacctattgcgtgaaaactacgttgaacaagacaagtct
cgcggtatctactttacccaagactgggcttctttacctggtgtaatggcagttgcttcc
ggtggtatccacgtatggcatatgcccgcattggtagaaatcttcggtgatgactccgta
ctgcaatttggtggtggtacactcggacacccctggggtaacgctcctggtgcaaccgct
aaccgtgtagctttggaagcttgcgtccaagcgcgtaacgaaggtcgtaacttggctcgt
gaaggtaacgacgttatccgtgaagctgctaagtggtctcctgaattggctgtcgcttgc
gaactgtggaaagaaatcaagttcgagtttgaggcaatggataccgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system