KEGG   Trichormus variabilis: Ava_C0117
Entry
Ava_C0117         CDS       T00277                                 
Name
(GenBank) serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor
Organism
ava  Trichormus variabilis
SSDB
Motif
Pfam: AAA_16 PAS_4 PAS_9 PAS Pkinase PAS_3 PAS_8 PK_Tyr_Ser-Thr HisKA_3 GAF GAF_2 HATPase_c HATPase_c_2 GAF_3 PAS_7 Kdo NACHT AAA_18 Mac TPR_12 KAP_NTPase Zeta_toxin ABC1 AAA_22 NB-ARC Pkinase_fungal APH
Other DBs
NCBI-ProteinID: ABA25205
CyanoBase: Ava_C0117
UniProt: Q3M1D8
Position
C:complement(138918..146003)
AA seq 2361 aa
MITLPGIAIQNKIYESSNSLVYRGIREDGVEIVVKMLKLDYPSPQELTRYRQEYKIIRSL
NLEGVIKAYSQQDYQRTLVILLEDFGGESLEKWMQKRPDIFCPMPLSTFLGIAIALCDIL
GRIHAANIIHKDINPGNIVFNLDTGVVKIIDFGVATQFNRTNPTFKSPHVLEGTLAYLSP
EQTGRMNRMLDYRTDFYSLGVTFYELLTGQLPFPTQDILELVHCHIAKPPIPVHELNATI
PKPISGIILKLMAKNAEDRYQSAWGIKADLERCAGQLAEMGQINAMSLGLQDVSEQFCIP
QKLYGREVQTKALLAAFDRVARKETFGEICQLESGIENAQFNVELMLVAGYAGVGKTALV
QELYKPITAKHGYFISGKFDQFRRNIPYSAIVDALQKLVQQLLGEPDEQVQQWQERLLTA
LGSNGQIIIDVIPEVELIIGKQPPVPEVGATEAQNRFNRIFQNFVRVFCSKEHPLVIFLD
DLQWSDSATLKLIELILLDEQTHYLFLIGAYRDSEVHPTHPLVLTLLELRNQGAVLQEIT
LAPLTLEPLSQLIAETLGRNIDTVRSLAQLVLRKTEGNPFFVGEFLRMLYSENLLIFNAK
QLSWQWDIAQIQARNITDNVVELLLLQLKKLPNETRQILRLAACVGSEFDLETLAIACEK
SPKIISLDLLAAINAGLIQPLSELDENLLVQDYKFLHDRVQQAAYALIDESHKQVVHLQI
GGNLLEKTSPEQRSDRLFEIIDHLNQGLELVTARSERTEIARLNLMAGQKAKAATAYEAA
FKYFTTGLKLLNWESWLSEYDLTLTLYSEAAEAAYLQGCFDEMEQLVEVVLARAKTVVDK
VQVYDSSIQRYLSQGNLKEALKIGLEVLKLLGVILPENPSELDVQGGLESTAALLAQREI
EDLSNLPEMTAPEPLAAMSILANIGAAAFIVSPALFMLITCKTVNLSINYGNAIWSPLYY
AGYGFVLCGVVQDIELGYKFGQLALSLAERLNTKKGKAKALQLFSDHVMQWKVHLKETIP
LLVEAYQEGVETGDFETAGYAAYDVCYNSFFVGESLTQLEQKTATYSKAVDRIRRESPST
WIAIVWQTILNLLDRSLNPSRLVGRVCNEEQALPHALAVKDGTAIQMLYLHKVILCYLFE
EYHQAVQTAILARQHFEEVTAIKVLPVFCFYHSLTLLSLLLDASNSEKLALLNCVNTNQE
KMQKWAEHAPMNYLHKFYLVEAEKARVLGQFLEAEELYEQAIAGAAENEYIQEEALTYEL
AAKHYLARGRSKIAQTYMKEAHYCYDRWGAIAKVKDLETRYPQFFSQSSRAASTSIPTTA
ATISNPFHTAFDLAAVMKASQAISREIELKQLLRSLMQTLIENAGAQTGYLILENSEEWS
IEAACELNTDENACATQVLQSIPIADQLPESIIQYVIRTLKAVTLNDATREGAFINEPYI
QQNQPQSIFCLPLLNQAKLVGVLYLENRLAAGVFTPERSQVLQLLSTQAAIAIENANLYS
ELRAKESKITQFLEAIPVGIAIVDAEGRPYYTNQCGNQLTGKETDTSIAPEQFSEAYQLY
VAGTDQIYPAESLPIVRALRGERIRTEDIEIRRDHVSILIEARGTPVFDRQGNITYAIAT
FQDITERKQAEKLLADYNCTLEQQVAERTAALRQSEANYRNLIQTANSIILRTDRQGRIR
YMNDYGLSFFGYEEDQILGRTLLETIVPETETSGRDLKQFVHDLFHNLEAPLPQAYLQTE
NENLCRNGRRVWIAWSNQAIFNEQGDVVEILSVGNDTTQRRQAEEALQRSEAKFRNIFEN
SQVGIFRTRLSDGLLLDANQRYANLLGFDSSEEMIGLEHATDYYLNTSDRQQFLEVLKRD
REVRSYEAQGRKRDGTVFWGLFSAYLNADDDYIEGVIADISDLKQTEAALQTSEERLRLA
LTASNQGLYDFDLKTEERIVNPEYALMLGYDPATFHETIPEWIARLHPDDRESVVATYRA
CITGEIPNFQVEYRLRTQDGQWKWIRSVGKIVTWNESGEPIRALGVVTDINDRKQAEAAL
QASEAELRALFSAIPDPLFVFSAEGRFLEIMVLERNLLWQPFEEMIGKTMHQLGREEADE
FLGYIQQVLRTQQILTVEYGAFLNGREMWFSARIAPISHDQVIWLVRDITAQKQAEEASI
LEERNRMAREIHDTLAQAFTGILAQVGAAKQVLTDDVEAAQAHLDLIKELARTGLTEARR
SVIALRPQLLEEGSLQSALHRLVAQIRAAATDTTLYYEIEGAVYSLPTEVENNLLRIGQE
ALTNAIRYANADEIRVELVYDRDQFCLRVRDNGQGFGVGSISASEGFGLLGMSERAERIG
AQLTIRSQPGQGTEIIVTVNP
NT seq 7086 nt   +upstreamnt  +downstreamnt
atgatcactctgcctggtattgctatccaaaacaaaatatacgaaagttccaattctcta
gtgtaccggggcattagagaggatggagtagagatcgtcgtaaaaatgctaaagcttgat
tatccctctccccaagaactaacccgctacagacaggaatataaaattattcgctccctg
aatctggaaggagttatcaaggcatacagccagcaggactatcaacgcactctggtgatt
ctcttagaagattttgggggagagtccctagaaaaatggatgcaaaagcgtccagatatt
ttctgcccgatgcctttatccacttttcttggtattgcgatcgccctttgcgacattctg
ggcagaatccatgcagccaatatcattcataaagatatcaaccctggaaacatagtcttt
aatctggatactggcgttgtcaaaattattgattttggggttgcgacccaatttaaccgc
accaatccgacgttcaaaagtccccatgtgttagaaggcacgcttgcctatctgtcgcca
gagcaaaccgggcggatgaatcggatgctcgactatcgcaccgatttctactcgctgggc
gtaaccttctacgaactgttaactggacagctaccgttccccactcaagacatcctagag
ctagttcattgccatattgccaaaccgccgattcctgtgcatgaattgaacgccacgatt
cccaaacctatttcaggcataattttgaagttgatggcgaaaaatgcggaggatcgctat
caaagtgcctggggcatcaaagcggatctagaacgctgcgccgggcaactggcagaaatg
ggtcagatcaacgctatgtcgttgggactgcaagatgtttcagaacagttttgcattcct
cagaaactgtatggacgagaagtccagactaaagcattattggcggcgtttgacagagtg
gctagaaaagagacgtttggcgaaatttgtcaactagagtcaggcatagaaaatgctcaa
ttcaatgtcgaactcatgctcgttgctggttatgctggcgttggcaaaacagcattggtg
caagaactctataaacccatcacagcaaagcacggctatttcatatcgggtaaatttgac
caatttaggcgcaatattccctacagcgccattgtggatgccctgcaaaagttggtgcag
caacttctgggggaaccggatgagcaagtgcaacagtggcaagagcgtctactcactgct
ttaggaagcaatgggcaaatcatcatagatgtcattccggaagttgaattaattattggc
aaacagccacccgtacccgaagttggagcaacggaagctcaaaatcgctttaatcgaatc
tttcaaaattttgtgcgggtgttttgttcaaaagaacatcccctggtcatcttcttagac
gatttacaatggtccgactccgcgacgctgaagttaatcgagttaatattactcgacgag
caaacccattatctatttttgattggagcctaccgagactcggaagtgcatccaacgcat
ccactagtattaacgctcttagaactacgaaaccaaggggcagtacttcaggagattacc
ttagcacccttaaccctcgaacccttgagtcaactgattgccgagacgctaggtcgcaat
attgacaccgttcgttctttagcccaattagtgttacgtaaaaccgaaggcaaccctttc
tttgtcggtgaatttttgcgaatgctgtatagcgaaaatctgttaatctttaatgcgaaa
cagttaagctggcagtgggatattgctcaaattcaagcccgaaatattaccgataatgta
gtggagttgctgctgctccagttgaagaaattgccaaatgaaacacggcaaattctccgc
ttagccgcttgtgttggatctgaatttgatttagagacgttagcgatcgcttgtgaaaaa
tcgccgaaaataatttctctagatttactagctgcaataaatgctggattaattcaacct
ctatctgaattagacgaaaacttgttagttcaagactacaagtttttgcacgatcgcgtt
cagcaagcggcttatgctttgattgatgaatcgcacaaacaggttgttcatctccaaatc
ggtggcaatttgctcgaaaaaacttcaccagagcaacgatccgatcggttgtttgaaatc
atcgatcatctcaatcaaggacttgagctagtcactgctcgatcagaacgaactgaaatt
gccagactgaatttaatggcaggacagaaagcaaaggcagcaacggcttatgaagcagct
tttaagtatttcactacagggcttaaactcctcaattgggagagttggctcagtgagtat
gaccttaccttaacgctgtactcagaagcagcagaagcggcgtatctccagggttgcttt
gatgagatggaacagttggtagaagtggtactcgctcgtgccaaaacagtggttgacaaa
gtgcaagtttacgatagcagcattcaaagatatttgtcacagggcaacctgaaagaagca
ctcaaaattggcttggaagtgttgaagctcctgggagtgattttaccagaaaatccaagt
gagttagatgttcaaggcggattggagtcaacggcggcactactcgcccaacgagaaatt
gaagacttgagtaatttaccagagatgactgcaccagaaccgctagcagcaatgtcaatc
ctagcgaatataggagctgctgcattcatagtatcaccagcactattcatgctgattact
tgcaaaacggtaaatttatcgatcaactacgggaatgctatctggtcaccactgtattat
gctggctacggatttgttctatgtggagttgttcaagacattgaactcggctataaattt
ggtcaattggctcttagtttggcagaacgattgaataccaaaaaaggcaaggctaaagca
ttacagttatttagtgaccatgttatgcaatggaaagtacatcttaaggagacgatacca
ctgctggttgaggcttatcaggaaggagtggaaaccggagactttgaaaccgctggttat
gctgcatatgacgtgtgctacaactcgtttttcgtcggtgagtcactcacccaactagaa
cagaaaactgcaacatatagcaaagcagttgatcgaatcagacgggaaagcccctcgact
tggattgcaatagtgtggcagaccattcttaatttgttagataggtctcttaatcccagt
cgcttagttggtcgggtgtgtaatgaagagcaggcattaccacacgcccttgcagttaaa
gatggaactgcaattcaaatgctatatctgcacaaagttatactgtgttatctatttgaa
gaatatcatcaagctgtacagactgctattttggcaaggcaacattttgaagaagtgaca
gcaataaaggttttacctgtattctgtttctatcattctctgacgcttttgagcctattg
ctcgatgcttcaaactctgaaaaattagctttgctaaactgcgtcaacaccaaccaagaa
aagatgcagaaatgggcagaacacgccccaatgaattatctacataaattttatctagtc
gaggcagagaaagcacgagtcttagggcaatttcttgaggctgaagaactttacgaacaa
gcgatcgcaggtgctgctgaaaatgagtatatccaggaagaagcattaacttatgaatta
gcggctaaacactatctagcgcgaggtcggtcaaaaattgctcaaacctacatgaaagag
gcgcactattgctacgatcgctggggcgcaatcgctaaagttaaagacttagaaactcgc
tatccacagttcttttctcagtcgtctagagccgcttccacatcaattcctactactgct
gcaactatctctaatcccttccatactgctttcgatttagcagcagtgatgaaagcttca
caggcgatttctcgtgaaattgaactgaagcaattgctgcgatcgctgatgcaaactttg
attgagaatgctggcgcacaaaccggatatctgattttagaaaactcagaagaatggtcg
attgaagcggcttgtgaactcaataccgatgagaatgcttgtgcgactcaggtgttacag
tctattccaattgccgatcaattgccagaatcaatcattcaatatgtgattcggactcta
aaggctgtcaccttaaatgatgcgactcgtgaaggtgcttttattaatgagccatacatt
caacagaaccagcctcaatctattttctgtttgccgctgctgaatcaagccaagctggtc
ggtgtattgtatttagaaaatcggttagcagctggagtatttacaccagagcgatcgcag
gtcttgcagctattatcgactcaagccgcgatcgccatcgaaaatgccaacctttactca
gaactgcgggctaaggaaagcaagatcacccagttcctcgaagcgattccggtgggaatt
gcgatcgtggatgccgagggtcgcccttactataccaaccaatgcggcaatcaactcacg
ggcaaagaaactgatacttccatagcaccagagcagttctcagaggcttatcagctttat
gtagcgggaacggatcaaatctatccagcggagagcttgcctattgtgcgggcattaagg
ggcgaacgcattaggactgaagatatagaaattcgtcgagatcatgtctcaattctaatt
gaggcacggggaacaccagttttcgatcgacagggcaatatcacttatgcgatcgctacc
tttcaggacattacagagcgcaaacaagccgagaaactcctggccgactacaactgcact
ttagagcaacaggttgcagaacgaactgctgctttacgacagagtgaggccaattaccgt
aacctgattcaaactgcgaattcaatcatccttcgcacggataggcaaggacgaattcga
tacatgaatgactatggactgagcttttttggttatgaggaagatcagattttagggcgt
accctactggaaacaatcgttccagaaaccgaaacatctggacgcgatctcaagcagttt
gttcacgatctgtttcacaatcttgaagctcccttgcctcaagcttacctgcaaaccgag
aatgaaaacctttgtcgaaacggtagacgggtttggattgcctggtcgaatcaagccatc
ttcaatgaacaaggagatgtcgttgaaatcttatcggtgggcaatgacaccacccagcgt
agacaagcagaagaggcattacaacgcagtgaagctaagttccgcaatatttttgaaaac
tcacaggttggcatcttccgcacccgcctctcggatggattacttctcgatgccaatcaa
cgctatgccaatctgcttggctttgattcatcagaggagatgattgggcttgaacacgcc
acagactactatctaaataccagcgatcgccaacaattccttgaggtgctgaagcgggat
cgggaagtgcgaagctatgaagcacaggggcgaaaacgagatgggacagtgttttgggga
ctgttctctgcttatctgaatgcagacgatgactacattgaaggggtgattgcggatatt
agcgatctcaaacaaacagaagccgctctacaaacgagtgaagaacgactacgcttagca
ttaaccgcttcaaatcaaggactctacgatttcgatttaaagactgaagaaagaattgtt
aacccggaatacgctttaatgctgggctacgatccagcaacattccacgaaaccattcct
gaatggattgctcgtttgcatcctgatgacagagaatcagttgtcgcaacctaccgtgct
tgtattactggagaaatccccaactttcaagtagagtatcgccttcgtacccaggatggt
cagtggaaatggattcgttctgtcggcaaaattgttacctggaatgaatccggtgaaccc
atccgagcgttgggagttgttacggatatcaacgatcgcaagcaagcagaagcagcattg
caagcctctgaagcagaactgcgggcgctcttttcagccattcccgatccattatttgta
ttctctgctgaagggcgattccttgaaataatggtactggaacgaaatctgctatggcaa
ccctttgaggagatgattggtaaaactatgcatcaactcggaagggaagaagctgatgag
tttctaggttatattcagcaggtactgagaacccaacaaatcctcacagtcgagtatggt
gcgtttctaaatggacgagaaatgtggttttcggctcgcattgccccaatcagccacgat
caggtgatttggctggtgcgagatattacggcgcagaagcaagcagaagaagcctcaatt
ttagaagaacgtaaccgtatggcacgcgaaattcacgatacactcgctcaggcgtttaca
gggattctggctcaggtcggtgctgcaaaacaggtgctaacggatgatgtagaagcagct
caggcacacctggatctgatcaaagaattggcacgaactggactgactgaagcacggcga
tcggtaattgcgctccgtcctcagcttttggaggagggcagtttacagagcgctctccat
cgtctcgtcgctcaaatcagggctgctgcaactgacaccaccttatattatgagattgag
ggtgcagtgtattctctacccactgaagtcgagaataacctactgcggattgggcaggaa
gccttaactaatgcgattagatacgccaatgccgacgaaattcgagtggagctagtctac
gatcgcgaccagttttgcttgcgcgtgagagacaatggacagggctttggagttggaagt
atttcagcctctgagggttttggcttactcggcatgagcgaacgggcagagcgcatcggc
gcacaactcacgattaggagtcaacctggacaaggaacagaaattattgtcaccgtcaac
ccttga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (63)   

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