KEGG   Azoarcus olearius BH72: azo1741
Entry
azo1741           CDS       T00441                                 
Name
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
azo  Azoarcus olearius BH72
Pathway
azo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:azo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    azo1741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azo03400]
    azo1741
Enzymes [BR:azo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     azo1741
DNA repair and recombination proteins [BR:azo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     azo1741
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S
Other DBs
NCBI-ProteinID: CAL94358
RhizoBase: azo1741
UniProt: A1K6A3
Position
1908782..1911427
AA seq 881 aa
MKAHDKRRDEARGMKPGAIAALAEYARKRDFSITAEPPVRGARPRAEGALGFVVQKHAAR
RLHYDFRLELDGTLKSWAIPKGPSLDPRVKRLAVHVEDHPLDYADFEGRIPQGQYGGGDV
IVWDRGLWQPRDPDPAAAYRAGKLSFHLLGEKLSGGWTLVRTRDGGSGDKAQWLLIKDAD
GAARPQSDYDVVVARPESVLTHAQLPARRDAAGAAGGEGAKKARVAALRGDAARNPAWIA
PELATAVEAPPPGEWRYELKFDGYRMLARVENGRARLYTRNHHDWTAKLAPLREAVESLG
ADSAWLDGEVVVTDAQGVPDFQALQNALELGRDADLRYFLFDLPYLDGEDLRKLPLEARR
ARLRALLGAHDHPRLAYSEDFPVPPQDILASACELRIEGVIGKRAGSPYRSVRSTDWIKL
KCRQRQEFVIVGYSAPQGGRQGFGALLLAVHDEAAGGRLRYAGKVGSGFSGASLKALHQR
MQPLRRPTPALALPVDSSVTRGATWLEPRLLCEVAFAMWTRDGLVRHAVFQGLRDDKPAA
DAVRERALPATAVARIQGDGRDDEDAPAPTAKVPSNGVRAGARRSPGTLAGVAISNPDRV
IDAASGVTKGELATFYCRIGAQLLPHLAGRPLSILRAPTGIDGERFFQRHADKMSMAGVH
LLPPDLDPDGERLMMVDTLEGVVGAAQMGTIEFHTWNATADRIERPDRIVFDLDPDPALP
WSRMVEATRLVLTLLDEIGLDAFLKTSGGKGIHVVVPLARRHDWEALKQFSRAVTRHLAR
ILPQRFADRMGPQNRVGRIFVDYLRNQRAASTVSAYSVRARPGLAVSVPITRQELERIDG
ADQWTVRNLHERLARLTRDPWEGYANRQVISAAMRAAVAAD
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgaaggcacacgacaaacgccgcgatgaagcgcgcggcatgaagccgggcgcgatcgcc
gctttggcggaatacgcccgcaagcgcgacttctcgatcaccgcggagccgccggtgcgc
ggcgcgcggccgcgcgccgagggcgccctcggcttcgtcgtgcagaagcatgccgcgcgc
cgcctgcactacgacttccgcctggaactcgacggcacgctgaagagctgggcgatcccc
aaggggccgagcctggacccgcgggtcaagcgcctggcggtgcacgtcgaagaccatccg
ctcgactacgccgacttcgagggccgcattccgcagggccagtacggcggcggcgacgtc
atcgtgtgggaccgcgggttgtggcagccgcgcgaccccgatcccgcggcggcctaccgc
gccggcaagctcagcttccacctgcttggcgaaaagctctccggcggctggaccctggtt
cgcacccgcgacggcggcagcggcgacaaggcgcaatggctgctgatcaaggatgcggac
ggcgctgcgcggccgcagtcggactacgacgtggtcgtcgcacggcccgagagcgtattg
acccacgctcaactgccagcgcggcgcgatgccgccggcgcggcgggcggcgagggcgcg
aagaaggcccgcgtggcagcgttgcgcggcgacgcggcacgcaatccggcctggatcgcg
ccggaactcgccaccgcggtggaggcgccaccgccgggcgaatggcgctacgaactcaag
ttcgatggctaccgcatgctcgcacgggtggaaaacggccgcgcgcggctctacacccgc
aaccatcacgactggaccgcaaaactggcaccgctgcgcgaggcggtggaaagcctgggt
gcggacagcgcctggctggacggcgaggtggtggtgaccgacgcccagggcgtgcccgat
ttccaggccctgcagaacgcgctggagctggggcgtgacgcggacctgcgctatttcctg
ttcgacctgccctacctggacggcgaagacctgcgcaagctgccgctggaagcgcgccga
gcccgcctgcgcgcactgctgggcgcgcacgaccatccgcggctggcgtattcggaggac
tttccggtgccgccgcaggacatcctcgccagcgcctgcgaattgcgcatcgagggcgtc
atcggcaagcgcgccggcagcccctaccgttcggtccgcagcaccgactggatcaagctc
aaatgccgccagcggcaggagttcgtgatcgtcggctacagcgcaccgcagggcgggcgc
caggggtttggcgccttgctgctggcggtgcacgacgaagccgcgggcgggcgcctgcgc
tacgccggcaaggtcggcagcggtttcagcggcgccagcctgaaggccttgcaccagcgc
atgcagccactgcgccgcccgaccccggcgctggcgctgccggtcgatagcagcgtcacc
cgcggcgccacctggctggagccgcgcctgctgtgcgaggtggcgtttgcgatgtggacc
cgcgacgggctggtgcgccatgcggtgttccagggcctgcgcgacgacaaacccgccgcc
gacgcggtgcgcgagcgcgcattgcccgccaccgccgtggcacgcattcaaggtgacgga
cgcgatgacgaagacgcgccggcgccgaccgccaaggtgccgtcgaacggcgtccgcgcc
ggcgcgaggcgcagtcccggcacgctcgcgggcgttgcgatcagcaacccggaccgcgtc
atcgacgccgccagcggcgtgaccaagggcgaactcgccaccttctactgccgcatcggc
gcgcagctgctgccccatctggcggggcggccgctgtccatcctgcgcgcgcccaccggc
atcgacggcgaacgcttcttccagcgccatgccgacaagatgtcgatggcgggcgtgcat
ctgctaccgcccgacctcgacccggacggcgagcgcctgatgatggtggatacgctggag
ggcgtggtcggcgcggcgcagatgggcacgatcgagttccacacctggaatgccaccgcc
gaccgcatcgagcgccccgaccgcatcgtgttcgacctcgaccccgaccccgcgctgccg
tggtcgcgcatggtggaggcgacccggctggtgctgacgctgctggacgaaatcggactg
gatgccttcctgaagaccagcggcggcaagggcatccacgtggtggtgccgctcgcgcgg
cggcacgactgggaggcgctgaagcagttctcgcgcgcggtcacccggcatctggcgcgc
atcctgcctcagcgctttgcggaccgcatggggccgcagaaccgggtagggcgcatcttc
gttgactacctgcgcaaccagcgcgcggcgagcacggtgtcggcctattcggtgcgtgcg
cgccccgggctggcggtgtcggtgccgatcacccgccaggagctggagcgcatcgacggc
gccgaccaatggacggtgcgcaacctgcacgagcggctggcgcggctcacccgcgaccca
tgggagggctacgccaaccgccaggtgatcagcgccgcgatgcgggccgcggtggcggcg
gactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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