KEGG   Bradyrhizobium diazoefficiens USDA 110: blr2398
Entry
blr2398           CDS       T00109                                 
Symbol
hemC
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00860  Porphyrin metabolism
bja01100  Metabolic pathways
bja01110  Biosynthesis of secondary metabolites
bja01120  Microbial metabolism in diverse environments
bja01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:bja00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    blr2398 (hemC)
Enzymes [BR:bja01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     blr2398 (hemC)
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC
Other DBs
NCBI-ProteinID: BAC47663
UniProt: Q89SK2
Position
2614388..2615329
AA seq 313 aa
MALAQTEEIARRLTAAVPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVLSG
ELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIGTN
AVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGLDR
VGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREVLW
VLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGRAVGLELLG
KGAAEIIERSRPR
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcgctggcacagacggaagagatcgcgcgccgcctgaccgccgccgtgcccggtctc
gacgtcgagatcgtcaagttcgacaccacgggcgatctcgaccagaccagcaaactgttg
ccgcatggcggcaagggcggcgccttcgtggcgcagatccgcgccgccgtcctgtcgggt
gagctccaggcggcgatgcattcgctgaaggacatgccgggcaacgaggacacgcccggc
ctcgtcatcggcgccacgctgtcgcgcgatccgccaagcgatgcgctggtgctgcgcgac
ggcgtgacgctggaggcgctgcgccagtcgcgcggcaagggttttaaaattggcaccaat
gccgtccgccgggccgcctatgcgcggcggttgttccccgatgtagaagtgatccacttc
cgtggggctgctgacacgcgcgtgcgaaagctcgacaatggcgagaagcagcgcctgccg
gatggcggcgcggtggggccggccgatgcgctgatcatggcgcgctcgggccttgatcgc
gttggtctggcgagccgcattgcctacgagtttacgccggcggagatgttgccggcggcg
gggcagggcatcgtcgccgtcgaatgcgccgcgcaggactggcaaacgcgaaaaatcctg
tcatcgatcgacgatcccgccgcccatgcctgtgccgatgctgagcgcgaggtgctgtgg
gtgctcaacggtcactgcaattcgccggtggcgggcttctcgaccatcgcaggcgatcag
atgtcgctcaccgcatccgtgctcgacctctccggcaacaccatcatcgaagcctcgcgc
acaggctccgccaaccggccgcgtgagcttggccgtgcggtgggacttgaactgctgggg
aagggcgctgccgagatcatcgagcgcagtcggccgcgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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