KEGG   Bacillus subtilis subsp. subtilis 168: BSU20340
Entry
BSU20340          CDS       T00010                                 
Symbol
yorL
Name
(RefSeq) DNA polymerase YorL
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU20340 (yorL)
   03430 Mismatch repair
    BSU20340 (yorL)
   03440 Homologous recombination
    BSU20340 (yorL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU20340 (yorL)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU20340 (yorL)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU20340 (yorL)
DNA replication proteins [BR:bsu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Other DBs
NCBI-GeneID: 939437
NCBI-ProteinID: NP_389916
Pasteur: BG13696
UniProt: O31902 A0A6M4JI35
Position
complement(2175596..2179513)
AA seq 1305 aa
MIGCHCHTDRSNIRLLDSTNSVKELLKTAVKMEYKGLAITDHEVLSAHLDAIRTVREMKK
KGDMPEDFKLILGNEAYLVDSLEEVRDNYKSGVTKFPHFLMLAMDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNIHLLKIKAFEETGDSQSI
KQHKLKIHEFITWCIEVFGKDKFFIELQPALSEEQIYCNKKLIDIANGYDLQMIVTTDAH
YLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYIDKEVIDQAIKNTMLI
GEMIEDYTIEHEPIIPKMELPNFKLRHLFKPAYDQYEYIKKMSESADEQDRYLLKLIEDG
FEEKLKTSELTREAFHKILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECG
GDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQK
ILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPL
KHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTKSN
AMMKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKET
YNKYIHPDVIEYEDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMR
LMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQM
VMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEELFFKKGKEIGTSDNLLNYVWNVQFKR
QFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWNTACLTVNSGGIDTEDTKDNKKTAATN
YGKVASAIGNIRQRGIKIDLPDINKADFGFRTDINNNSILFGLKGMNGIGDDVIHHIVLN
RPYSDFNDFIERMFKSGIIKKGQVIQLIKGGCFDSFGNRQEIMKAFISLISEPKSKLTLS
NLKMLIENNIVPSEFAQEVRFFRFKDYISKKVYKTLKSPKDKLFLLDDVSASFYNQHFSE
DSVVDMLNGQLVISEKAFKKEYDNKMSNIKSWITTEEPLKKLNDCLLIKEWEKYADGSLG
KWEMDSLSYYYNDHELSGVNFAKYDIADFYKLPAEPVKGKPYQWRGKTLYEYETTRIIGT
VLDRDKNKHAITLLTPTGVVTVKQWSGSFSHYNKQISRSIGGGKKEVIEKSWYTRGTLLM
FTGFRRGNNFIPKVYKDSIYNHTVCRIDFVDNEGSMSLTTKRAEI
NT seq 3918 nt   +upstreamnt  +downstreamnt
ttgataggatgtcactgtcacacagataggagtaacataaggcttctagactcaacaaac
tcagttaaagaactgctcaaaactgcagtaaagatggaatataagggattggccataaca
gaccatgaagtcctctcagcacatttagatgctattcgaacagttagagaaatgaaaaag
aagggggatatgccagaagattttaaactgatattgggcaatgaagcgtacctagtcgat
tctttagaggaagttcgagataactataaatcgggagtgacaaaatttccgcatttcttg
atgttggcaatggatccaaaaggacatgagcagttaagaatactgtcttctcaagcctgg
gaaaactcattttatacaggaacaatggaaagagtgccgacagtaaaaaaggatgtagag
gagctattaagtaaagatccaggccacatcattgctaccacagcttgcttggggtctgag
gtaaacattcacctgttaaagataaaggcttttgaagaaactggtgattctcagtcaatt
aagcagcacaaactaaagattcatgagtttataacttggtgtatagaggtttttgggaag
gataagttttttatcgagcttcaacctgcactgagtgaagaacagatttactgtaacaag
aagctgatagatatagccaacgggtatgacttgcaaatgattgttacaacagatgctcac
tatctaagaccagaagatagagcaattcatcaagcctttttaaacgctaaggatggagaa
agagaagttgattccttttatgaagcctgtttcgttcaaaacgttgatgaaattcacgag
agaatggactacattgataaagaagtcatcgatcaggccataaaaaatacaatgctcatt
ggtgagatgattgaagactatactatagagcacgaaccaattatccctaagatggagctt
cctaactttaaattaagacatttatttaaaccagcatatgatcaatatgaatatataaaa
aagatgtctgaatcagcagatgaacaagatagatatctccttaagttaattgaggacgga
tttgaagagaaattaaaaacaagcgaactaacgagagaagcttttcataaaatattgaac
aggattaacgttgaactgggtgaactttgggaaatcagccaaaagctgaatcagtctatg
tcttcttattacataacagttagagaaatcattaatattatttgggatgatgagtgtgga
ggagatagtttagttggggcagccaggggaagtgctgcaggttacttagttaattatcta
ctcgacaatactcaaattaatccaatgcaatatgatttaccacattggagacatatacat
aaatcgagacctgacctaccagatatcgatattgatactgaaggatcaaaaagacaaaaa
attcttaaggcactaagagaaaggtttggagacaagcgtgttcttcaaattgctactttt
ggaactgagggttcaaaatcagcgcttcagacagcatgtagaggcttaggaatcgataat
gatatatcccagtatttaagtggaatgattccatttgaaagaggatctaactggcctttg
aagcattgtttttatggtgacaaagaaactggcaggaagccaattaaagagtttattagg
gaggttgaacaataccctaatcttaaagaaacagctttaaaaattgaagggttaactaat
aagcgctcttctcatgcagccggagtaattatctttaacgatgaatatacaaagtcgaat
gcaatgatgaaaactcctaaaggagcttatattacacagtttaatatgggtgacagtgaa
gccatgggctcagtaaagtttgaccttcttacaattgaagctttagataagattagagta
acattagaccaattaatcgagaataatgaaattgaatggcaaggaagcttgaaggaaaca
tacaacaaatacatccatccagacgtaattgagtatgaagatgataagctatgggaaatg
gctggtaatggggaaatcatggatttattccagttctcaactgaagtcggtcatcaatca
gttgtcaaagtaaaacctaagaacttacttgaagcagcagtaaccaattctttaatgagg
cttatgtcagacggtgaagaacagcctgtagatacatatgttaaatacaaaaataacctt
aataaatggtatgaagaaatgacacggtacggtctaagcgaaaaggaaatcagagtaatg
gagaggcaccttaaggacatttatggtgttgctgatactcaagaagtggttatgcagatg
gttatggataaagatatagctaactttgacattaaagaatcaaattatcttaggaaatcc
atagcaaaaaagaaagaagatgtactaaaagaagtggaagaattgttttttaaaaaagga
aaggagattggcacttctgataacctgttgaattatgtctggaatgttcaatttaaaaga
cagtttggctacagttttagtttacttcataccttggcatattcaattattgcattacag
gaattgaacttaaactatcgatataatcctttatactggaatactgcttgtttaacggta
aacagcggaggaatagataccgaggatacaaaagacaacaaaaagacagctgctacaaac
tacggaaaagttgcttcagccatcggaaacattagacaaagagggattaaaatagacctc
ccagatataaataaggctgattttggttttaggactgatattaacaacaattcaatttta
tttggacttaaaggaatgaatggaattggagacgatgttattcatcatatagttctaaat
agaccatatagtgactttaacgactttattgaaagaatgtttaagagcggcattattaag
aaaggacaagtaatccaattaataaaaggaggctgctttgattcttttggaaacaggcaa
gaaatcatgaaggcctttattagcttaatatcagaaccaaaaagtaagcttacgttgtct
aatttaaaaatgctaattgaaaacaacattgttccttcagaatttgcacaagaagtgaga
ttctttcgttttaaagattacatcagcaaaaaggtgtacaaaacattaaagtcgccaaaa
gataaactttttttattggacgatgtatcagcttcgttttataaccagcatttcagtgag
gatagtgtagttgacatgttaaacgggcagcttgtcatttctgaaaaagcttttaaaaaa
gaatatgataacaagatgtctaatataaagtcctggataacaacagaagaaccactgaag
aaattgaatgattgtttattaataaaagagtgggaaaaatacgccgatgggtcattagga
aagtgggaaatggattcattgagctattattataatgaccatgagctttctggtgtaaac
tttgccaagtatgatattgctgacttttataaactgccagcagagccggtcaaaggtaaa
ccttatcaatggagagggaaaactctctatgaatatgagactacacggattataggcact
gttttagatagggataaaaacaaacatgcaattactcttctaacacctacaggggtggtt
acagttaaacagtggtcgggcagctttagtcattacaataaacagatttctagatcaatt
ggtggcggaaagaaagaggtaatcgagaaatcttggtataccagaggaacattgctcatg
tttactggtttcagaagaggtaacaattttattccgaaggtctataaagatagcatatat
aatcacacagtctgcagaatagattttgttgataatgaaggaagtatgagtttgacaact
aaaagggcagaaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (380)   
   KEGG ORTHOLOGY (1)   
   RefGene (375)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (397)   

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