KEGG   Bos taurus (cow): 505019
Entry
505019            CDS       T01008                                 
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
bta  Bos taurus (cow)
Pathway
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    505019 (U2SURP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bta03041]
    505019 (U2SURP)
Spliceosome [BR:bta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    505019 (U2SURP)
 Complex B
    505019 (U2SURP)
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 505019
NCBI-ProteinID: XP_002685082
BGD-bta: BT11309
VGNC: 36557
Position
1:complement(125933235..125986609)
AA seq 1029 aa
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RENVSDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKAGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcggctctcagaaggccagttcaaagaccagatcatcagat
gttcattcatctggatcttcagatgcccatatggatgcatctggaccctcagatagtgat
atgccaagtcggactcgacctaagagcccaagaaaacataattataggaatgagagtgcc
cgtgaaaatgtttctgattctcctcatcagaatctctcaaggcctcttctagaaaacaag
cttaaagcattcagtattggaaaaatgagtacagctaagcgaactttgagtaagaaggag
caagaagaattaaagaagaaggaggatgaaaaggcagctgctgagatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacgtttgtgcgcggaggtgtt
gttaatgcagcaaaagaagaacatgaaacagatgaaaaaagaggtaaaatctataagcca
tcttcaagatttgcagatcaaaaaaatcccccaaatcagtcatccaacgaaagaccacca
tctcttcttgtgatagaaaccaaaaaacctccactgaagaaaggggagaaagaaaagaaa
aaaagcaatttggaactcttcaaagaagaattgaaacaaattcaagaagagcgtgacgag
agacataaaacaaaaggcaggttaagtcgatttgaacctccacagtcagattctgatggt
cagcgtcgttctatggacgcgccttcaagaagaaatcgatcatctggtgttcttgatgat
tatgcacctggctcacatgatgtaggcgatccaagcactactaatttataccttggaaac
attaatccacagatgaatgaagaaatgttgtgccaagaatttggaagatttggcccatta
gccagtgtgaaaattatgtggcctagaactgatgaagaaagggcaagagagagaaattgt
ggctttgtggcctttatgaacagaagagatgctgaaagagctttaaaaaatttaaatgga
aagatgattatgtcttttgaaatgaagttaggttggggtaaagctgtgcctattcctcca
catccaatatacattccgccttccatgatggaacatacgcttcccccacctccatcagga
ctgccttttaatgcgcagcctagagagcggttaaaaaaccccaatgctcccatgttacca
ccacctaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgccctgatacatcgaatgatagagtttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagagatcaacaatcctatgttcaga
ttcttatttgaaaaccagacaccagcccatgtttactataggtggaagctttattctatt
ctccagggagattcaccaactaagtggcggacggaagattttcgtatgttcaaaaatgga
tctttttggaggccaccaccattaaatccatatctgcatgggatgtcagaagagcaggaa
acagaagcttttgtagaggagccaagtaaaaagggagcacttaaggaagaacagagagac
aaattagaagaaattctgcgggggttaactccaaggaaaaatgatattggagatgcaatg
gttttctgtcttaataatgctgaagctgctgaagaaatcgtggattgcattactgagtcc
ttgtccatcttaaagacaccccttcccaaaaagattgccagattatatttggtttctgat
gttttatacaactcttcagccaaagttgccaatgcttcctattatagaaaattttttgaa
acaaagttgtgtcagatattttcagacctcaatgctacctatcgtacaattcaaggccat
ttacagtctgaaaactttaagcaacgggtaatgacctgctttagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaactacaaaatattttcttaggacttgtaaat
attattgaagaaaaggaagcagaggatgtaccagatgaccttgatggtgcccccattgag
gaagagctggatggtgcccctctagaagatgtggatggaattcctattgatgctactcct
attgatgaccttgatggagtccctataaagagccttgatgatgatcttgatggagtgcct
ttggatgcaactgaagattcaaagaagaatgagcctatatttaaagttgccccatcaaaa
tgggaagctgtagatgaatctgaattggaagcacaggctgtaacaacttctaaatgggag
ttatttgaccagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagt
gaagatgaagaagatactcagagttccaaatctgaagaacatcatttgtactctaatcca
atcaaagaagaaatgactgagtccaagttctctaagtactctgaaatgagtgaggaaaaa
cgagctaaactccgtgaaatcgagctcaaagttatgaagtttcaagatgaattggaatct
ggaaaaagacctaaaaaagcaggccagagctttcaggaacaagtagaacactacagggat
aaacttcttcagcgagagaaagagaaggaattagaaagagagcgagaaagagataagaag
gataaagaaaaactggaatctcgatccaaagacaagaaggagaaagatgaatgtactcca
acaaggaaagaaaggaaaaggcgacacagtacgtcccctagcccatctcgcagtagcagt
ggtagacgagtgaaatccccatcaccaaaatcggagcgatcagagcgttcagaaagatct
cataaagagagctcacggtccaggtcatctcacaaagattctcctagagatgttagcaaa
aaggccaaaagatctccatctggttcaaggacacctaaaagatctaggcgatcacggtct
agatcccctaaaaaatcagggaagaaatccagatcccagtcccgatctccacacaggtct
cataaaaagtcaaagaaaaacaaacactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

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