KEGG   Bos taurus (cow): 538494
Entry
538494            CDS       T01008                                 
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
  KO
K13203  zinc finger RNA-binding protein
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bta03041]
    538494 (ZFR)
Spliceosome [BR:bta03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    538494 (ZFR)
SSDB
Motif
Pfam: DZF_N DZF_C zf-met zf-C2H2_jaz zf-U1
Other DBs
NCBI-GeneID: 538494
NCBI-ProteinID: XP_024837281
BGD-bta: BT17838
Ensembl: ENSBTAG00000008414
VGNC: 37171
Position
20:41213969..41297712
AA seq 1081 aa
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSSVLWSSMDQQPASG
VAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTA
HTATDYGYTQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVA
AAAQPQPSVAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSS
TVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAA
AAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEG
QKHKKKEAALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL
HTKLGKPIPSTEPNVVSQATSSTAVSASKPTASPSSIAASNCTVNTSSIATSSVKGLTTT
GNSSLNSTANTKVSAVPANMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGTECVKNTPVT
SVPIPEVKPDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFND
PNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEE
RWRMEMRRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQGP
APLRRPDSSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKSKSKEG
DDKKEGGKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLSRIAENLPKQLA
VISPEKYDIKCAVSEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPDV
LDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEK
AISSASSPQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSS
AQFALRLLAFRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDN
F
NT seq 3246 nt   +upstreamnt  +downstreamnt
atgattcccatatgccctgtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccagtatagttctgttctctggagcagcatggaccagcagccagcttcgggt
gtagcctactctcatccaaccaccgttgctagctacactgtccatcaggctccagtagct
gctcacacagttactgctgcctatgcaccagcagccgccacagttgcagttgccaggcct
gctccagtcgctgttgcagctgctgcaacagctgctgcttatggaggttaccccactgca
cacacagcgactgactatggttatacacagaggcaacaagaagcacctccaccaccaccc
ccagctactacacagaactaccaggattcatactcatatgtaagatccacagctcctgct
gtagcttatgatagtaagcagtactaccaacaaccaacagcaactgctgctgctgtagct
gccgccgcccagcctcagccttccgttgctgagacctactatcagacagcccctaaagca
ggttatagccaaggtgcaactcagtatacacaagcccagcaaactcgacaagtgacagcc
ataaaaccagccacaccaagtccagctaccactactttctccatttatcctgtatcctcc
accgtacagccagtagcagctgcagctactgtggtgccatcctatacccagagtgctact
tatagtaccacggcagttacctattctggtacatcttattcaggttatgaagcagcagtg
tattcagctgcatcctcctactaccaacagcagcagcagcaacagaagcaggcagcagca
gcggcggcggcggctgctgcaacagctgcctggacagggaccacctttactaaaaaagca
ccattccaaaataaacaactgaaaccaaaacagcctcccaaaccaccccagattcactat
tgtgatgtctgtaagatcagctgtgctggaccacagacttataaagaacatttagaaggg
cagaaacataaaaaaaaagaagccgcattgaaagcctcacagaataccagcagcagcaac
aactctactcgtgggactcaaaatcagctacgttgtgagctctgtgatgtgtcttgtaca
ggagcagatgcatatgctgcccacattcgtggtgctaagcatcagaaagtggttaaatta
cacacaaaacttggtaaacccattccttcaacagaaccaaacgttgttagccaagctact
tcttcaacagctgtatctgcttcaaagccaactgcctctccttcaagcattgcagcaagc
aattgtactgtgaatacttcatcaattgcaacttcttcagtgaaaggtcttacaactaca
ggaaactcgtctcttaatagcacagccaacactaaagtatcagcagtgcctgcaaatatg
gctgccaagaaaacatctacacccaaaataaactttgttggtggtaataagctgcagtca
acaggaaataaaacagaagacttaaaaggaactgaatgtgttaaaaacacccctgtcact
tctgtaccaattccagaagtaaagccagacacagtgtcagaaccagtcacacctgcgtct
cttgctgctttgcagagcgacgtgcagccagtgggccatgattatgtggaggaggtacga
aatgatgaaggaaaagtgattagattccattgcaaattatgcgagtgcagctttaatgat
cccaatgctaaggagatgcatttaaaaggacgaagacacagacttcaatataaaaaaaaa
gtaaatccagatttgcaagtagaagtaaagcccagtattagagcaagaaagattcaagaa
gagaaaatgagaaagcaaatgcagaaagaggagtactggcgaagaagagaagaggaagaa
cgctggagaatggaaatgagacgttacgaagaggacatgtactggagaagaatggaggaa
gaacagcatcattgggatgatcgccgccgaatgcctgatggaggctatcctcatggtccc
ccgggcccactaggccttctgggagtccgaccaggcatgcctcctcagccacaggggcct
gcacccttacgtcgtcctgactcatctgatgaccgttatgtaatgacaaagcatgctacc
atttatccaactgaagaggaattacaggcggttcagaaaattgtttcaatcactgaacgt
gctttaaaacttgtttcagacagcttgtctgaacacgagaagagcaagagcaaagaggga
gatgataagaaagagggaggtaaagacagagctttaaaaggagttttgcgagtgggagta
ttggcgaaaggattacttctccgaggagatagaaatgtcaaccttgttttgctgtgctca
gagaaaccttcaaagacattattaagccgtattgcagaaaacctacccaagcagcttgct
gttataagtcctgagaagtatgacataaaatgtgctgtttctgaagcggcaataattttg
aactcatgtgtggaacccaaaatgcaagtcactatcaccctgacatctccaattattcga
gaagagaacatgagggaaggagatgtaacctcgggtatggtgaaagacccaccggacgtc
ttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttccag
gctagagctaatggtctacagtcctgtgtgattatcatacgtattctccgggacctctgt
caacgagttccaacttggtctgattttccaagctgggcaatggagttactagtagagaaa
gcaatcagtagtgcttctagtcctcaaagccctggagatgctctgagaagagtttttgag
tgcatttcttcagggattattcttaaaggtagtcctggacttctggatccttgtgagaag
gatcccttcgataccttggcaacaatgactgaccagcagcgtgaagacatcacatccagt
gcacagtttgcattgcgactccttgcattccgccagatacacaaagttctaggcatggat
ccactaccacagatgaaccagcgttttaacatccacaacaacagaaaacgaagaagggat
agtgatggagttgatggatttgaggctgaggggaaaaaagacaaaaaagattatgataac
ttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system