KEGG   Canis lupus familiaris (dog): 100568301
Entry
100568301         CDS       T01007                                 
Symbol
TRIM6
Name
(RefSeq) tripartite motif-containing protein 6
  KO
K11999  tripartite motif-containing protein 6/22/34
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfa04121]
    100568301 (TRIM6)
Ubiquitin system [BR:cfa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100568301 (TRIM6)
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-B_box zf-C3HC4 zf-C3HC4_2 zf-RING_5 PRY zf-C3HC4_3 zf-RING_2 zf-RING_6 zf-Nse zf-RING_10 Bacillus_HBL FAM76 U-box Fib_alpha TRAF3_RING zf-UDP DUF6871
Other DBs
NCBI-GeneID: 100568301
NCBI-ProteinID: NP_001192119
Ensembl: ENSCAFG00000048998
UniProt: A0A8I3P879 A0A8P0T5M5
Position
21:28383550..28390775
AA seq 487 aa
MTSAVLVDIRDEVTCPICLELLTEPVSIDCGHSFCQACIMGNSTELVMGQDGESSCPVCQ
TSYQPGDLRPNRHLANIAERLREVVLGPGMQLKVTLCAHHGEKLQLFCKEDGKLICWLCE
RSQEHRGHHTVLMEEVAHEYQEKFQESLGKLRQEQQEAERLTAVIIGKRTSWKNQMEPER
HRIQTEFNKLRSILDKEEQRQLKKLEEEERKGLSILEEAENELVQQSETLRELISDLELR
CQGSAMELLQDVSDVMKRSEFWTLKKPEALPTKLKSMFRVPDLKKMLRVFRELTDVQSYW
VDVTLNPHTANLNLVMSKNRRQVRFVGAKLSASYLEEHYDCGILGSQHFSSGKHYWEVDV
AKKTDWILGVCSNSVGPTYCFSQFTNNRNVYSRYQPQSGYWVIGLHHKHEYRAYEESSTS
LLLSMMVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLSPYFNPCNCVVPM
TLRRPSS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgacttcagcggtcctggtggacatacgagatgaagtgacctgccccatctgcctggag
ctcctgacagaacccgtgagcatagactgtggccacagcttctgccaagcttgcatcatg
ggaaatagcacggagttggtgatgggccaagacggggaaagcagctgtcctgtatgtcag
accagctaccagcccggggacctgcggcctaatcggcacctggccaacatagcggagagg
ctcagagaggtggtactaggccctgggatgcagctgaaagtgactctctgtgcacaccat
ggggaaaagctccagctcttctgtaaggaggatgggaagcttatatgctggctttgtgag
cggtctcaggagcaccgtggtcaccacacggtccttatggaggaggttgcccacgagtat
caggagaagttccaggagtctctggggaagctgaggcaagagcaacaggaagctgagaga
ctaacagctgttatcatagggaagaggacatcatggaagaatcagatggaacctgagaga
cacaggatccagacagaatttaataagttgagaagcatcctggacaaagaggagcagcga
caattgaaaaagctggaggaggaagagaggaagggcctgagtattttagaagaggctgag
aatgagctggtccagcagagcgaaacactgagggagctcatttctgatctggagcttcgg
tgtcaggggtcagcaatggagctgctgcaggatgtgagtgatgtcatgaaaagaagtgag
ttctggaccctaaagaagccagaagctctccctaccaagctgaagagtatgtttcgagtt
ccagatctcaaaaagatgctgcgagtgtttagagaactgacggatgtccagagctactgg
gtggacgtgactctgaatccacacacggctaacttaaatctcgtcatgtctaaaaaccga
agacaggtgagatttgtgggtgccaagctatctgcgtcttacctggaagagcattatgac
tgtggtatcctgggctctcagcacttctcctctgggaaacattactgggaggtagatgtg
gccaagaagactgactggatcctgggggtgtgcagtaattcagtgggaccaacgtactgt
ttcagccagtttacgaacaatcgaaatgtctactccagatatcaacctcagagtggatac
tgggtgattgggctccatcataaacatgaatatagagcctatgaggaatcttctacttcc
ctgctcctctccatgatggtaccccctcgccgtgttggggttttcttagactacgaggcc
ggcactgtttccttttataatgtcacaaaccatggctttcccatctatactttctctaaa
tattactttcctaccaccctttctccatatttcaatccttgcaactgtgtagtcccaatg
accctgcgtcgcccaagctcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (43)   

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