KEGG   Canis lupus familiaris (dog): 100856703
Entry
100856703         CDS       T01007                                 
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
  KO
K16498  protocadherin delta 1
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cfa01009]
    100856703 (PCDH1)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cfa04515]
    100856703 (PCDH1)
Protein phosphatases and associated proteins [BR:cfa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100856703 (PCDH1)
Cell adhesion molecules [BR:cfa04515]
 Cadherins
  Protocadherins
   100856703 (PCDH1)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2
Other DBs
NCBI-GeneID: 100856703
NCBI-ProteinID: XP_003638961
Ensembl: ENSCAFG00000006229
VGNC: 44294
UniProt: A0A8C0RYU1 A0A8I3P9T9
Position
2:complement(33863495..33889885)
AA seq 1232 aa
MDSGAGGPRCPEAALLILGTARMGPLKPSPGPSGQRLLLALLLLLAASPGHATRVVYKVP
EEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQN
QLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPENTNIGS
LFPIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDRERWDS
YDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKAN
DSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTN
PKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEG
ENAAVTCVVANDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPP
LSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSL
EPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDC
NDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVIQNGTG
TILSSLSFDREHQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHQL
LTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHH
GLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYE
RSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSSKA
SKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDL
GRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTN
PPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALP
EDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSSPSRRT
KSSALKLSTFVPYQDRGGQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDS
ATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq 3699 nt   +upstreamnt  +downstreamnt
atggacagcggggccggcggcccgcgctgccccgaggcggccctcctgattctaggtact
gccaggatggggcccctgaagcccagcccaggccccagcgggcaacggttgctgctggca
ctgctgcttctgctggctgcatcccccggtcatgccactcgggtggtgtacaaagtaccg
gaggaacagccacccaacaccctcattgggagcctcgcagctgactatggctttccagat
gtgggccacttgtacaaactagaggtaggcgccccatacctgcgagtggatggcaagacg
ggagacatcttcaccactgagacctctatcgaccgcgaggggctgcgtgaatgccagaac
cagctccctggtgagccttgcatcctggagtttgaggtgtctattacggacctcgtgcag
aatggcagtccccggctgttagagggccagatagaggtacaggacatcaatgacaacaca
cccaactttgcctcaccagtcatcacgctacccatcccggagaacaccaacattggctca
ctcttccccatcccggtggcctctgaccgtgatgctggccccaacggtgtggcatcctat
gagctgcaggccgggcccgaggcccaggagctatttgggcttcaggtggcagaggaccag
gaggggaagcagccacagctcatcgtgatgggcaacctggaccgggagcgctgggattcc
tatgacctcaccatcaaggtgcaggatggtggcagccccccacgtgccagcagtgccctg
ctgcgagtcactgtgcttgacaccaatgacaacgcccccaagtttgaacggccttcctac
gaagctgaactgtctgagaacagccccataggccactcggtcatccaggtgaaggccaac
gactcggaccaaggtgccaacgcggagattgactacacgttccaccaggcgcccgaggtg
gtgaggcgtctcctgcgactggacagaaacactggacttatcactgtacagggccccgtg
gatcgtgaggacctaagtaccctgcgcttctcggtgctcgccaaggaccgaggcaccaac
cccaagagtgcccgtgcccaagtggtagtgactgtgaaggacatgaatgacaatgccccc
accattgagatccggggcatagggctggtgacccatcaagatgggatggccaatatctca
gaggatgtggcagaggagacagcagtggccttggtgcaggtatctgaccgagatgaggga
gagaatgcagctgtcacctgtgtggtggcaaatgatgtacccttccagctacgccaggcc
agtgagacaggaagtgacagcaaaaagaaatacttccttcagaccaccactccgctcgac
tacgagaaggtcaaagactataccatagagattgtagctgtggactctggcaacccccca
ctctcgagcaccaactccctcaaggtccaggtggtggacgtcaatgacaatgcccctgtc
ttcacacagagcatcacagaggtcgccttcccagaaaacaacaagccgggtgaagtggtc
gctgaagtcactgccagtgatgccgactcaggctctaatgccgagctggtttactctctg
gagcctgagccggctgccaagggcctcttcaccatctcacctgacactggagagatccgg
gtgaagacatcccttgaccgggaacagcgggacagttatgagttaaaagtggtggcagct
gaccggggcagtcccagcctgcagggcacagccaccgtccttgtcaatgttctggattgc
aatgacaatgaccccaagtttatgctgagtggctacaacttctcggtgatggagaacatg
ccagcgctgagtccagtgggcatggtgactgtcattgatggggacaaaggggagaatgcc
cgggtacagctgacggtggagcaggacaatggtgactttgttatccaaaatggtacgggc
accatcctctccagcctgagctttgatcgagaacatcaaagcacctataccttccagctg
aaggcagtggatggtggtgtcccacctcgctcagcttacgttggtgtcaccatcaatgtg
ctggatgagaatgacaacgcgccctttatcactgccccttccaacacctctcaccagctg
ttgaccccccagacccgtcttggtgagacggtcagccaggtgacagctgaagacattgac
tctggtgtcaatgcggagttgacctacagcattgctggtggcaacccttacggactcttc
cagattgggtcacactcaggtgccatcacccttgagaaggagattgagcggcgccaccat
gggctacaccgcctcgtggtaaaggtcagtgaccgtggcaagcccccgcgctatggcaca
gccttggtccacctttatgtcaatgagaccctggccaaccgcacgcttctggagaccctg
ctgggccacagcctggacacgccactggacatcgacattgctggggatccagaatatgag
cgctccaagcaacgtggcaacatcctcttcggtgtggtggctggtgtcgtggctgtggcc
ttgctcattgccctggcagtgcttgtacgctactgccggcagcgggaggccaagagtggc
taccaggccggtaagaaggagaccaaggacctgtatgcccccaagcccagcagcaaagcc
tccaagggcaacaaaagcaagggcaagaagagcaagtccccgaagcccgtgaagccagtg
gaagatgaggacgaggccgggctgcagaaatccctcaagttcaatctgatgagcgacgcc
cccggagatagcccccgcatccacctgcccctcaactacccaccgggcagccctgatctg
ggccgccactaccgctctaactccccactgccttccatccagctgcagccccagtcaccc
tcggcctccaagaagcaccaggtggtgcaggacctgccacccgcaaacacatttgtgggc
actggtgacaccacgtccacgggctctgagcagtactccgactacagctaccgcaccaac
ccccccaaataccccagcaagcagttacctcaccgccgcgtcaccttctccgccaccagt
caggcccaagagctgcaggacccatcccagcacagttactatgacagtggcctggaggag
tctgagacgccatccagcaagtcatcctcgggaccccgactcggtccgctggctctgcct
gaggatcactatgaacgcaccacccctgatggcagcataggagagatggagcaccccgag
aacgacctgcgccctttgcctgacgttgctatgacaggcacatgtacccaggagtgcagc
gagtttggccactccgacacatgctggatgcctggccagtcatctcccagccgccggacc
aagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgaggagggcaggag
cctgtgggcgccggcagccccagccccccggaagaccggaacaccaaaacggcccctgtg
cgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgcaaggactcg
gccaccttggaggaaatccccctgacccagacctcggacttcccacctgcagccacaccg
gcgtctgcccagacagccaagcgcgagatctacctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (22)   
   UniProt (2)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (3)   
   Pfam (3)   
All databases (65)   

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