KEGG   Canis lupus familiaris (dog): 403826
Entry
403826            CDS       T01007                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain precursor
  KO
K19719  collagen type II alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04151  PI3K-Akt signaling pathway
cfa04510  Focal adhesion
cfa04512  ECM-receptor interaction
cfa04974  Protein digestion and absorption
cfa05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    403826 (COL2A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    403826 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    403826 (COL2A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    403826 (COL2A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    403826 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cfa00536]
    403826 (COL2A1)
Glycosaminoglycan binding proteins [BR:cfa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   403826 (COL2A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 403826
NCBI-ProteinID: NP_001006952
Ensembl: ENSCAFG00000009059
VGNC: 39471
UniProt: O77753 A0A8C0PFU8
Position
27:complement(39518936..39549645)
AA seq 1487 aa
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGSPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGDLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq 4464 nt   +upstreamnt  +downstreamnt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccgaatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgtcccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacccggagacatcaaggatatcgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggcgcccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggtcctcctggcccccctggcccccctggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggggtgatgcaa
gggccaatgggccccatgggacctcgaggacctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggggaacctggggaacccggcgtctctggtcccatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
gggaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggcgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagccggtgctccaggtgtgaagggagagagcggttcaccgggtgagaatggttctcca
ggcccaatgggtccccgcggcctgcccggagagagaggacggaccggtcctgctggtgct
gcgggcgcccgggggaacgatggccaaccaggccccgcgggccctccgggtcctgtaggt
cctgccggcggtcctggcttccctggtgctcccggcgccaagggggaagctggccccact
ggcgcccgaggtcccgaaggcgctcaaggtcctcgcggcgagcctggcactcctgggtcc
cccgggccggctggtgcctctggtaaccccggaactgacggaattcctggagctaaagga
tctgctggcgctcctggcatcgctggcgcccccggcttcccggggccccgtggtccacct
ggccctcaaggtgcgactggtcctctgggcccgaaaggtcagacgggcgaacctggaatt
gctggcttcaaaggcgaacaaggccccaagggcgagcccggccctgctggcccccaagga
gcccccggtcctgctggtgaagaaggcaaacgaggtgcccgtggagagcctggtggcgct
gggcccgttggtccccccggagaaaggggggctcctggcaaccgcggtttcccaggtcag
gatggtctggcaggtccaaagggagcccccggagagcgtgggcccagcggccttgctggt
cccaagggagctaatggggaccctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggtcgccctggcgatgctggtcctcaaggcaaagtcggtccttctggagcc
cctggtgaagatggtcgccccggacctccaggtcctcagggcgctcgtgggcagcctggt
gtcatgggtttccctggtcccaaaggtgccaacggcgagcctggcaaggctggtgagaag
ggacttcccggtgctcctggtctgagaggtcttccaggcaaagatggtgagactggtgct
gcaggaccccccggacctgctggacctgccggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctccgggtcccccaggcgaaggtggaaaacca
ggtgaccagggtgtccctggtgaagcgggagcccccggcctcgtgggtcccaggggtgaa
cgaggcttcccaggcgaacgtggctctcccggcgcccagggcctccaggggccccgtggc
ctccccggcactcctggcacagacggtcccaaaggcgcatctggcccggctggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggcgcggctggcatc
gccgggcccaaaggagacaggggagacgttggtgagaaaggccccgagggagcccctgga
aaggacggaggacgaggcctgactggtcccattggcccccctggccccgctggcgccaat
ggtgagaagggagaagttggacctcctggtcctgcaggaaccgctggtgctcgtggcgcc
ccgggtgaacgtggagagactggaccccctgggcccgctggattcgcaggtcctcccggt
gctgatggccagccgggtgccaaaggcgagcaaggagaggccggccagaaaggcgatgct
ggtgccccaggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggcgctcgaggagacagcggcccccctggccgc
gctggtgaccctggtctccaaggtcctgctggaccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccagggtctggccggtcagagg
ggcatcgttggtctacctgggcagcgtggtgagagaggattccctggcttgcccggccca
tcgggtgagcccggcaagcagggagctcctggtgcatctggagaccgaggccccccaggc
cccgtgggtcctcctggtctgactggtccttctggtgaacctggacgagagggcagcccc
ggtgctgatggtcctcctggcagagatggcgcagctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcctggagcccctgggtcccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggtgcacaaggtcccatgggtcctgca
ggaccggctggagcccggggaatcccaggccctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcaggga
ctgcccggccctcctggtccttctggagatcaaggtgcttctggccctgctggtccttct
ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaacggaatc
cctggccccatcggacctcctggtccccgtggacgttcaggcgaaactggccctgctggt
cctcccggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctgggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcggccggcgacctgagacagcatgatgccgaggtggacgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgtacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggatgccatgaaggttttctgcaacatggagactggc
gagacgtgcgtctaccccaacccagcgagcgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacatatctggtttggagaaaccatcaatggtggcttccacttcagc
tacggtgatgacaacctggctcccaacactgccaacgtccagatgaccttcctccgcctg
ctgtccaccgagggctctcagaatatcacctaccactgcaagaacagcattgcctacctg
gacgaagcagccggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag
atccgggctgagggcaacagcaggttcacatatactgttctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcgcccatggacataggagggcccgagcaggaatttggtgtggac
atcgggcctgtctgcttcttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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