KEGG   Canis lupus familiaris (dog): 403982
Entry
403982            CDS       T01007                                 
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
  KO
K06527  vascular cell adhesion molecule 1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04064  NF-kappa B signaling pathway
cfa04514  Cell adhesion molecules
cfa04668  TNF signaling pathway
cfa04670  Leukocyte transendothelial migration
cfa04933  AGE-RAGE signaling pathway in diabetic complications
cfa05143  African trypanosomiasis
cfa05144  Malaria
cfa05417  Lipid and atherosclerosis
cfa05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    403982 (VCAM1)
   04668 TNF signaling pathway
    403982 (VCAM1)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    403982 (VCAM1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    403982 (VCAM1)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    403982 (VCAM1)
   05143 African trypanosomiasis
    403982 (VCAM1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    403982 (VCAM1)
   05418 Fluid shear stress and atherosclerosis
    403982 (VCAM1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    403982 (VCAM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cfa04090]
    403982 (VCAM1)
   04091 Lectins [BR:cfa04091]
    403982 (VCAM1)
CD molecules [BR:cfa04090]
 Proteins
  403982 (VCAM1)
Lectins [BR:cfa04091]
 I-type lectins (Siglecs)
  403982 (VCAM1)
SSDB
Motif
Pfam: Ig_3 I-set C2-set ig Ig_2 V-set C2-set_2 Ig_4 ICAM_N Ig_5 ICAM1_3_5_D2 Ig_6 C1-set Adhes-Ig_like Receptor_2B4
Other DBs
NCBI-GeneID: 403982
NCBI-ProteinID: NP_001003298
Ensembl: ENSCAFG00000020004
VGNC: 48240
UniProt: Q28260
Position
6:complement(52013558..52031171)
AA seq 739 aa
MPRKMVVIFGASNILWMVFAVSQASKMEIFLEPRVAAQIGDVISLTCSTTGCETPSFSWR
TQIDSPLNGKVKNEGNNSTLTMDPVSFNNEHAYLCTATCGSKKLEKGIQVEIYSFPKDPE
IQLSGPLEVGKPVTVTCLVRDVYPFDRLEMNLLNGNDLLQSKDFLEPMEKKSLETKSLEV
TFTPTNEDIGKGLVCRAQLHMDEIDFEPKERETTKELQVYISPRNTFISVTPSMRLQEGG
SVTMTCASEGLPPPQIFWSKKLDNGNLQLLSGNATLTLIAMRLEDSGTYVCEGVNEVGKD
GKEVELIVQEKPFTVEISPGPQIIAQIGDSVVLTCGVTDCESPSFSWRTQIDSPLSGTVK
VEGAKSTLTLSPVNLENEHSYLCTVTCGHKKLEKGIKVDLYSFPRDPEVEMSGLLVDGNP
VTVSCEVPNVYPSDRLEIELFKGETIIESKSFLEDMDKKSLETKSLEMTFIPTTEDTGKV
LVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTVVVSPSSIVEEGSPVNMTCSSDGLP
APNILWSRRLSNGRLQSLSEDPILTLTSAKMEDSGIYVCEGINQAGISRKEVELIIQVAP
KDIQLIAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLKSRDGAYTIHKVQL
EDAGVYECESKNEAGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIPAIGMIIYFA
RRANMKGSYSLVEAQKSKV
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgcctaggaagatggtcgtgatctttggagcctcaaatatactttggatggtgtttgct
gtttctcaagcttcgaaaatggagatcttccttgaacccagagtcgctgctcagattggt
gatgtcatttctctgacttgcagtacgacgggctgtgagaccccatctttctcttggaga
acccagatagacagtccactgaatgggaaagtgaagaatgaggggaacaattccacgttg
accatggaccctgttagcttcaacaatgaacatgcttacttgtgtacagcgacttgtgga
tcgaagaaactggaaaaaggcattcaagtggagatttattctttccctaaggacccagag
atccaactgagtggccccctagaagttgggaagccagtcacagtcacgtgtttggtccgt
gatgtttacccatttgacaggctggagatgaatttgctgaatggcaatgatctcctacag
agtaaggactttctagagcctatggagaagaagtccctggagaccaagagtttggaggta
accttcactcctaccaatgaggatattgggaaaggtcttgtttgccgagcacaattacac
atggatgaaattgactttgagcccaaagaaagggagactaccaaagagctacaagtctac
atctcacccaggaacacatttatctctgtgactccctctatgaggctgcaagaaggcggt
tctgtgacaatgacatgtgccagtgaaggcctaccacctccacagattttctggagcaaa
aaattagataatgggaatctacagctcctctctgggaatgcaactctcactttaattgct
atgaggctggaagattctggaacatatgtctgtgaaggtgtcaatgaagtcgggaaggat
ggaaaagaggtggaattaatcgttcaagagaaaccattcactgttgagatctccccagga
ccccagattatcgctcagatcggtgattcagttgtgttaacatgtggtgtcacagactgc
gagtccccatctttctcttggagaacccagatagatagtcctctgagtgggacggtgaag
gttgaaggggccaagtctacgctgaccctaagccctgtgaatttggagaatgaacattct
tatctgtgcaccgtgacctgtggacataagaaattggaaaagggaattaaggtggacctc
tactcattccctagagatccagaggttgagatgagtggtctactagtggatggaaaccca
gtcactgtgagctgcgaggttcctaatgtgtatccttctgaccgactggagattgaatta
tttaagggggagactatcatagaaagtaaaagctttctggaggacatggacaagaaatct
ctagaaactaagagtttggaaatgaccttcatccccaccacagaagatactggaaaagtt
cttgtttgtctggctaagttacatattgatgaaatggaatttgaacccaaacaaaggcag
agtacacagacactttatgttaatgttgcccccagggatacaaccgtcgtggtcagcccc
tcctccatcgtggaggaaggtagtcctgtgaacatgacctgctctagcgatggccttcca
gctccgaacatcctgtggagcaggcggctaagtaatgggcgcctgcagtctctttctgag
gatccaattctcaccttaacttctgcaaaaatggaagattctggtatttatgtgtgtgaa
gggattaaccaggctggaataagcagaaaagaagtagaattaattatccaagttgctccg
aaagacatacagcttatagcttttccttctgagagtgtcaaggaaggagacactgtcatt
atctcctgtacatgtggaaatgttccaaaaacttggataatcctgaagaaaaaagcagag
acgggagacacagtgctaaagtccagagatggtgcatataccatccacaaggtccagtta
gaggatgcgggagtgtacgaatgtgaatctaaaaatgaggctggcttgcaattaagaagt
ttaaccctcgatgttaaaggaagagaaaataacaaggactatttttctccagaactactc
gtgctttattgtgcatcttccttgataataccagccattgggatgatcatttactttgcc
agaagagccaacatgaaggggtcatacagtcttgtagaagcacagaaatcaaaagtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (48)   

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