KEGG   Canis lupus familiaris (dog): 475682
Entry
475682            CDS       T01007                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6 isoform X2
  KO
K12833  pre-mRNA branch site protein p14
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    475682 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfa03041]
    475682 (SF3B6)
Spliceosome [BR:cfa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    475682 (SF3B6)
 Complex B
    475682 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    475682 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 475682
NCBI-ProteinID: XP_532889
Ensembl: ENSCAFG00000003957
VGNC: 46074
UniProt: A0A8C0QGX1 A0A8I3PC35
Position
17:complement(18447236..18457834)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcggccaagagggcgaacattcgacttccacccgaagtaaatcggatt
ttatatataagaaatttgccatacaaaatcacagctgaagaaatgtatgatatatttggg
aaatatggacctattcgtcagatccgagtggggaacacacctgaaactagaggaacagct
tatgtggtctatgaagacatctttgatgccaagaatgcatgtgatcacctttcaggattc
aatgtttgtaacagatacctggtggttttgtactataatgccaacagggcatttcagaag
atggacacaaagaagaaggaagaacagttgaagcttctcaaggagaaatatggcatcaac
acagatccaccaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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