KEGG   Canis lupus familiaris (dog): 475896
Entry
475896            CDS       T01007                                 
Symbol
PSMC2
Name
(RefSeq) 26S proteasome regulatory subunit 7
  KO
K03061  26S proteasome regulatory subunit T1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03050  Proteasome
cfa05010  Alzheimer disease
cfa05012  Parkinson disease
cfa05014  Amyotrophic lateral sclerosis
cfa05016  Huntington disease
cfa05017  Spinocerebellar ataxia
cfa05020  Prion disease
cfa05022  Pathways of neurodegeneration - multiple diseases
cfa05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    475896 (PSMC2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    475896 (PSMC2)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    475896 (PSMC2)
   05012 Parkinson disease
    475896 (PSMC2)
   05014 Amyotrophic lateral sclerosis
    475896 (PSMC2)
   05016 Huntington disease
    475896 (PSMC2)
   05017 Spinocerebellar ataxia
    475896 (PSMC2)
   05020 Prion disease
    475896 (PSMC2)
   05022 Pathways of neurodegeneration - multiple diseases
    475896 (PSMC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cfa03051]
    475896 (PSMC2)
Proteasome [BR:cfa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     475896 (PSMC2)
SSDB
Motif
Pfam: AAA PRS7_OB AAA_lid_3 AAA_22 AAA_2 AAA_5 AAA_16 DUF815 nSTAND3 RuvB_N AAA_28 AAA_18 AAA_7 AAA_14 Prot_ATP_ID_OB_C AAA_33 TIP49 Sigma54_activ_2 Mg_chelatase RNA_helicase AAA_24 IstB_IS21 AAA_3
Other DBs
NCBI-GeneID: 475896
NCBI-ProteinID: XP_533103
Ensembl: ENSCAFG00000004204
VGNC: 45102
UniProt: A0A8C0RL07
Position
18:complement(16488537..16501956)
AA seq 433 aa
MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgccggattacctcggtgcggatcagcgcaaaaccaaagaggacgagaaggacgacaag
cccatccgagctctggatgagggagatattgccttgctgaaaacttatggtcaaagcact
tactctaggcagataaagcaagttgaagatgacattcaacagcttctcaagaaaattaat
gagctcactggtattaaagaatctgatactggcctggccccaccagcactctgggatttg
gctgcagataagcaaacactgcagagtgaacagcctttgcaggttgcgaggtgtacaaag
ataatcaatgctgattcggaggacccaaagtacattataaacgtgaagcagtttgccaag
tttgtggtggacctcagtgatcaagtagcacctacggacattgaagaagggatgagagtg
ggtgtggacagaaataagtatcagattcatattccgctgcctcctaagattgacccaaca
gttaccatgatgcaggtggaggaaaaacctgatgtcacatacagtgatgtgggtggctgt
aaggaacagattgagaaacttcgagaagtagttgaaaccccattacttcatccagagagg
tttgttaacctcggcattgagcctcccaagggtgtgctgctttttggtccgccgggtaca
ggcaagacactctgtgctcgagcagttgctaacaggactgacgcttgcttcattcgagtt
attggatctgaacttgtacagaagtacgtcggtgagggggctcgaatggttcgtgagctc
tttgaaatggccaggaccaaaaaagcctgtcttatcttctttgatgaaattgatgctatt
ggaggggctcgttttgatgatggtgctggaggagacaatgaagtacagaggacgatgctg
gaactgatcaatcagctggatggttttgatcctcgaggtaacattaaagtgctgatggcc
actaacagacctgatactttggatcctgcactgatgaggccagggagattggacaggaag
attgaatttagcttacctgatctagagggtcggactcacatttttaagattcatgctcgt
tcaatgagtgttgaaagagatatcagatttgaattgttagcacgactgtgtccaaatagc
actggtgctgagattagaagcgtctgcacagaagctggtatgtttgccatcagagcacgg
cgaaaaattgctactgagaaggatttcttggaggctgtaaataaggtcattaagtcttat
gccaaattcagcgctactccccgctatatgacatacaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (159)   
   KEGG ORTHOLOGY (1)   
   RefGene (153)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (23)   
   Pfam (23)   
All databases (205)   

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