KEGG   Canis lupus familiaris (dog): 476350
Entry
476350            CDS       T01007                                 
Symbol
SEMA4D
Name
(RefSeq) semaphorin-4D isoform X1
  KO
K06521  semaphorin 4
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    476350 (SEMA4D)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cfa04090]
    476350 (SEMA4D)
CD molecules [BR:cfa04090]
 Proteins
  476350 (SEMA4D)
SSDB
Motif
Pfam: Sema PSI ig Ig_3 Ig_5 I-set Ig_2 baeRF_family3
Other DBs
NCBI-GeneID: 476350
NCBI-ProteinID: XP_005616015
Ensembl: ENSCAFG00000002180
VGNC: 53974
UniProt: A0A8P0NZW3
Position
1:97278644..97342104
AA seq 1009 aa
MAWPAQGGKPRLPSGPSRPRLCADLPCWALGPPHGVCTPVSGRMERPRDQAQASEDTVLG
TTGGRSWKEKIQNFFVRPQRSAPLKNRVALDICGGDLTQCLGDAGPQHSHHPPAPGRAAG
RGPPALSSIGRHPHHGLPAHEPSLPEPPPWRLRVRMCAPIGGLLAALAMAFGMTVAFAPV
PRITWEHREVQLEKFHEPGIFNYSVLLLSEDKSTLYVGAREAVFALSALNVSKKQHEAYW
KVSEDKKAKCAEKGKSRQTECLNYIRVLQPLSASALYVCGTNAFQPACDHLNLTSFQFLG
RTEDGKGRCPFDPAQSYTSVMVDGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAIPWLN
EPSFVFADVIREHPDGVDSGDDRVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTL
QKKWTSFLKARLICSRPDNNLVFNVLQDIFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCA
YNLSTAEAVFSGGKYMQSATVEQSHTKWVRYNGAVPTPRPGACINREARAANFSSSLTLP
DKTLQFIKDHPLMDGSVTPIDNRPRLIKRDVNYTQIVVDRTRALDGTVYDVMFVSTDRGA
LHKAVSFEHEAHIIEETQLFPDFEPIQTLLLNSQQGKRFVYAGSSSGVVQAPVAFCGKHG
SCEDCVLARDPYCAWSRAAEACVDLHRTDSPSRTLVQQMSGDTSVCPNETKSFREHFFKH
GGTAELKCSQKSNLARVVWTFRDRVLKAQTPKYGLVGRRDLLIFDLSEGDSGVYQCLSEE
RVRNRTVLQLLAKHVLEVRVVPRTPAASTPPAARTEGDRTILRVSTEPTPGPPPQTPAMR
GPTPSPAPTGGTCKPKTIINTVPEVHSEKTMYLKSSDNRLLMFLFLFFFVLCLGLFSYNC
YKGYLPGHCLKLRSAMLLGKKQPASDFSDFEQSVKETLVEQGSFSQQNGGQPRPALDTGY
ETEQDTMASRVPTDREDSQRLDDLPVRDRPFDVKCELKYADSDADVDAE
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggcctggccggcccagggcggcaagccccggctcccctctggcccctccagaccccgt
ctgtgcgctgacctcccctgctgggcactggggcctccgcatggggtgtgcactccggtg
tcggggaggatggagagaccgcgggaccaagcccaggcttctgaggacaccgtcctggga
acaacagggggcaggtcctggaaggagaagattcagaatttcttcgtgaggccgcagaga
agcgcaccattgaagaaccgggtggccctcgacatctgcggtggggacctcacccagtgc
ctgggagatgcgggtcctcagcattcacaccatccacccgctccgggccgtgctgcaggt
cgtggccccccggctctgagcagcattggccgtcacccccaccacgggctccctgcccac
gagccttcactaccggagccccccccgtggcgcctgcgcgtgagaatgtgcgcccccatc
ggtgggctgcttgccgccctggccatggcatttgggatgacggtggcattcgcaccggtc
cccaggatcacctgggagcacagagaggtgcagctggagaagtttcacgagcccggcatc
ttcaactactcggtgttgctgctaagtgaggacaagagcaccctgtacgtgggtgcccgg
gaggccgtgtttgccctgagcgcactcaacgtctccaagaagcagcatgaggcgtattgg
aaggtctcggaagataaaaaagcaaaatgtgcagaaaagggcaaatcaagacagacagaa
tgtctcaactacatccgcgtgctgcagccactcagtgccagcgccctgtacgtgtgcggg
accaacgcgttccagccagcctgcgaccacctgaacttaacgtcctttcagtttctgggg
cgaacagaagatggaaagggcaggtgccccttcgaccccgcacagagctacacttctgtc
atggttgacggggagctgtattctgggacgtcctacaactttctgggaagtgagcccatc
atctcccgaaactcgtcccatagccctctgaggacggagtacgcgatcccgtggctcaac
gagccaagcttcgtctttgctgacgtgatccgagaacacccagatggcgtggacagcggg
gatgaccgggtctacttcttcttcaccgaggtgtctgtggagtatgagtttgtgttcaag
ctgatgatcccacgagtggccagggtgtgcaagggggaccagggtggcctgcggaccctg
cagaagaagtggacgtctttcctcaaggccaggctgatctgttcccggccagacaacaac
ctcgtcttcaacgtgctgcaggacatctttgtcctcaggtccccagacctcaaggagccc
gtgttctacggggtcttcaccccacagctgaacaacgtggggctgtcggctgtgtgtgcc
tacaacctgtccacggccgaggcggtcttctccggcgggaagtacatgcagagcgccacg
gtggagcagtcccacaccaagtgggtgcgctacaacggggccgtgcccacgccgcggccc
ggggcgtgcatcaaccgtgaagcgcgggccgccaacttctccagctccctcactctgccg
gacaagaccttacagttcatcaaagaccaccctctcatggacggctccgtgaccccgata
gacaacaggcccaggctgatcaagagagacgtgaactacacgcagatcgtggtggacagg
acacgggccctggacggcaccgtctatgacgtcatgtttgtcagcacagaccggggtgcc
ctgcacaaagccgtcagcttcgagcatgaggcccacatcatcgaggagacgcagctcttc
ccggactttgagccgatccagacgctgctgctgaattcccagcagggcaagagatttgtg
tacgcgggttccagctcgggtgtggtgcaggcccccgtggccttctgcgggaagcacggg
agctgcgaggactgcgtgctggcccgcgacccctactgcgcctggagccgtgccgccgag
gcctgcgtggacctgcaccggacagacagccccagcaggactttggttcagcagatgagc
ggtgacacgtccgtctgccccaatgaaactaaaagtttccgggagcattttttcaagcac
ggcggcacagcagaactgaaatgctcccaaaagtcgaacctggcccgggtggtgtggacg
ttccgggaccgcgtactcaaggcccagacccccaagtatggcctggtgggcaggagagac
ttgctcatcttcgacctgtcagagggagacagcggggtgtaccagtgcctgtcggaggag
agagtcaggaacaggacggtcctgcagctgctggccaagcacgttctggaagtcagggtg
gttcctaggaccccggctgcctccaccccaccagccgcccggacggaaggcgacaggacc
atcctcagagtgtcgacggagcccaccccaggccccccgccccagaccccggccatgcgg
ggccccacgcccagccccgcgcccaccggcggcacctgcaaaccaaagaccatcatcaac
acggtccctgaggtccactcggagaagaccatgtatctcaagtccagtgacaaccgcctg
ctcatgttcctcttcctcttcttcttcgtgctctgcctcggcctcttttcctacaactgc
tacaagggctacctgcccggccactgcctgaagctccgctccgccatgctgctggggaag
aagcagcccgcgtccgacttctccgactttgagcagagcgtgaaggagacgctggtggag
cagggcagcttctcgcagcagaacggggggcagccccggccggccctggacaccggctac
gagacggagcaggacaccatggccagccgggtgcccaccgacagggaagactcgcagagg
ctcgacgacctgccggtccgggacaggccgtttgacgtcaagtgtgagctcaagtatgcc
gactcggacgcggacgtggacgcggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (25)   
   UniProt (1)   
   RefSeq(pep) (24)   
DNA sequence (25)   
   RefSeq(nuc) (25)   
Protein domain (8)   
   Pfam (8)   
All databases (111)   

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