KEGG   Canis lupus familiaris (dog): 477581
Entry
477581            CDS       T01007                                 
Symbol
A1CF
Name
(RefSeq) APOBEC1 complementation factor isoform X1
  KO
K24978  APOBEC1 complementation factor
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    477581 (A1CF)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     477581 (A1CF)
SSDB
Motif
Pfam: RRM_1 DND1_DSRM RRM_7 RRM_5 BRAP2
Other DBs
NCBI-GeneID: 477581
NCBI-ProteinID: XP_534776
Ensembl: ENSCAFG00000015581
VGNC: 37399
UniProt: A0A8C0TIC8 A0A8I3PZK3
Position
26:36912827..36995367
AA seq 590 aa
MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFI
GKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNRQEAKDAIKQLNNYE
IRNGRLLGVCASVDNCRLFVGGIPKTKKREEILAEMKKVTEGVVDVIVYPSAADKTRNRG
FAFVEYESHRTAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLML
STSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKMLDGSPIEVTL
AKPVDKDSYVRYTRGTGGRGSMLQGEYTYSLGHVYDPTTTYLGAPVFYAPQAYTAIPSLH
FPATKGHLGNRAIIRAPSVREIYMNVPVGAAGVRGLAGRGYLAYTGLGRGYQVKGDKRED
KLYDLLPGMELTPMNPVTLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQRQLFL
YKITIPALANQNPTIHPFTPPKLSAYVDEAKTYAAEYTLQTLGIPTDGADAPTAAAATAF
PGYAVPNATAPVSAAQLKQAVTLGQDLAYTTYEVYPTFAVTARGDGYGAF
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggaatcaaatcacaaatccggggatggattgagcggcacccagaaggaagcagccctc
cgcgcactggtccagcgcacaggatatagcttggtccaggaaaatggacaaagaaaatat
ggcggccctccaccgggctgggatgctgcacccccagaaagaggctgtgaaatttttatt
ggaaaacttccccgagacctttttgaggatgaacttataccactatgtgaaaaaattggt
aaaatttatgaaatgagaatgatgatggattttaatggcaacaatagagggtatgcattt
gtaactttctcaaatagacaggaagccaaggatgcaatcaagcaacttaacaactacgaa
attagaaacgggcgcctcctcggggtgtgcgccagcgtggacaactgtcggctgtttgtg
gggggcatcccgaagaccaagaagagagaagagatcttagcagagatgaagaaggtcacc
gagggcgtcgtcgacgtcatcgtctacccgagcgccgcagataagacccgaaaccggggc
tttgccttcgtggagtatgagagtcatcgcacggctgccatggcccgaaggaagctgctg
ccaggaaggattcagttatggggacatcccatcgccgtagactgggcggaaccggaagta
gaggttgatgaggacacgatgtcgtcggtgaaaatcttgtacgtgagaaatctgatgctg
tctacctcggaagagatgattgagaaagaattcaacaatattaaaccaggtgctgtggaa
agggtaaagaagatccgagactatgcttttgtgcacttcagtaatcgagaagatgctgtt
gaggctatgaaagctttaaatgggaagatgctggatggttcccccattgaagtgacccta
gccaagccagtagacaaagacagttatgttaggtacacccgaggcacgggcggaagaggc
agcatgctgcaaggagagtacacctactctttgggccatgtttatgatcccaccacgacc
taccttggagctcctgtcttctatgctcctcaggcctatacagcaattcccagccttcat
ttcccagccaccaaaggacaccttggcaacagggccatcatccgagctccttctgtgaga
gaaatttacatgaatgtacctgtaggggccgcgggagtgagaggactggccggccgtggc
tatttggcctatacaggcctgggtcgtggataccaggtcaagggagacaagagagaagac
aaactctatgaccttttacctgggatggagctcaccccaatgaatcctgtcactttaaaa
ccccaaggaattaaacttgctccccagatattagaagaaatttgtcagaaaaacaactgg
ggacagccagtgtatcagctgcactcggccattggacaagatcagagacaactattctta
tacaagataaccattcctgccctggccaaccagaatcctacaatccaccccttcacgcct
ccgaagctaagtgcgtacgtggatgaagcaaagacctacgcggcggagtacaccctgcag
accctgggcattcccactgacggggccgacgcccccaccgcggccgccgccaccgccttc
ccaggatacgctgtccccaacgcaacggcgcctgtgtccgcagcccagctcaagcaagca
gtgacccttggacaagacttagcatatacgacgtatgaggtctaccccacttttgcagtg
actgcccgaggggatggatatggagccttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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