KEGG   Canis lupus familiaris (dog): 478523
Entry
478523            CDS       T01007                                 
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D isoform X1
  KO
K14007  protein transport protein SEC24
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    478523 (SEC24D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    478523 (SEC24D)
Membrane trafficking [BR:cfa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    478523 (SEC24D)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin GDP_Man_Dehyd Nore1-SARAH
Other DBs
NCBI-GeneID: 478523
NCBI-ProteinID: XP_005639374
Ensembl: ENSCAFG00000012345
VGNC: 45975
UniProt: A0A8C0TVC4
Position
32:4279402..4383982
AA seq 1034 aa
MSQQGYVATPAYSQSQPGIGLSSPHYGHYGDPSHAGSAPGMMKPAGPLGAAAPGGMLPQG
PSPPGPHQFGQSGAHAQGHPPQRFTGPPPVNSAAPVNSAAPSYAPYSPSAQSSYPSPAST
SSVTQLGNQFNAMHINSYGSGMAAPVQGPPGPPSAPSFQGPSRPPQPSIMQPGSQVLPPP
PTALNGPGASPLPPSTHRQDGLPGPQYQPPPLPGQTLGPGYSPQQAANYGLQMAGGQLAY
PGGFPGGPAQMAGPPQLQKKLDPDSIPSPIQVIENDRATRGGQIYATNTRGQVPPLVTTD
CVIQDQGNASPRYIRCTTYCFPCTSDMAKQAQIPLAAIIKPFATIPSNETPLYLVNHGEN
GPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELS
LGSYEYVATLDYCRKNKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTVLEKLPKEEQE
ETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHN
LLDQIPEMFADSNENETVFAPVIQAGMEALKAADCAGKLFIFHSSLPTAEAPGKLRNRDD
KKLINTDKEKILFQPQTNVYDSLAKDCVAHGCCVTLFLFPSQYVDVASLGLVPQLTGGTL
YKYNNFQMHMDSQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGIFMNNTTDVEM
AAIDCDKAVTVEFKHDDKLGEDSGALIQCAVLYTTIGGQRRLRIHNLSLNCSSQLADLYK
SCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDS
MKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVK
STTLPAAIRCSESRLSEEGIFLLANGLNMFLWLGVSSPPELVQGIFNVPSFAHVNTDMTL
LPEVGNPYSQTLRMIMSIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVD
FLCCVHKEICQLLN
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgagtcaacaagggtatgtagctacacccgcctattctcagtcccagcctggaataggc
ctttcttcaccacattatggacactatggggacccatctcatgcaggttctgcaccaggt
atgatgaagccagcagggcctttgggggctgctgcccctggggggatgttgcctcagggc
ccttcacctcctggaccccatcaatttggccagagtggagctcatgcccaagggcatcct
cctcaaagatttacaggtcctccacctgtcaacagtgcagcacctgtcaacagtgcagca
ccctcctacgcaccatactcaccttctgcacaatcatcttatccaagtcctgcgtccact
tcatctgtcacccaactgggcaatcagttcaatgctatgcacatcaacagctatggttca
ggcatggctgcccctgtccaggggccccctggccctccatcagcaccttcattccagggt
ccttcacgacctccacagccatccattatgcagcctggatctcaggttctcccaccacca
cctaccgcactaaatggccctggtgcctcgcccttgcctccatctacacacaggcaggat
gggcttcctgggcctcagtaccagcccccgcctcttccaggacagaccctgggccctgga
tattcgccacagcaggcagccaactatggtctgcagatggcaggcgggcagctcgcctac
ccaggaggcttccctggaggtcctgcacagatggctggtccaccacaactccagaagaag
ctggatcctgactccatccccagcccaattcaggtgatcgagaatgacagagccacaaga
ggaggacaaatttatgccaccaataccagaggccaggtccctcccctggtcactacagat
tgtgtgatacaagatcaaggcaatgctagtcctcgatacattcgttgtacaacatactgt
ttcccgtgcacttcagatatggccaagcaagctcagattccattagctgctatcatcaaa
ccctttgccacaattccttcaaatgagactcccctttatttggtaaatcatggagagaat
ggaccagtcagatgcaacaggtgcaaagcctatatgtgcccatttatgcagttcattgaa
ggaggaaggaggtatcagtgtggattttgcaactgtgtgaatgatgttccaccgttctat
ttccaacatctggaccacatcgggagaaggctggaccactatgagaagccggagctatct
ctaggatcttatgaatatgttgctactttggattactgcagaaagaataagcctcccaat
ccaccagcctttatcttcatgattgatgtttcatatagtaacatcaagaatggacttgtg
aagctcatatgtgaagaactgaagactgtgctggaaaaacttccaaaggaagaacaagaa
gaaacttctgcaatccgagtcggttttatcacatataacaaagtgctgcatttctttaat
gtaaagagtaacttggcccagcctcagatgatggtggtgactgatgttggagaggtcttt
gttcctctactggatggtttccttgtcaactatcaagaatcccagtctgtgattcacaac
ttattggaccagattccagagatgtttgcagactctaatgaaaatgagactgtctttgct
cctgtcatccaggctggcatggaagcactaaaggcagcagactgtgccgggaagctgttc
atcttccattcctccttgccgactgcagaagcaccagggaagctcagaaacagagatgac
aaaaagctaattaatacagacaaagagaagatacttttccagccccaaacaaatgtctat
gactcgctggccaaggactgtgtggctcatggctgctgtgtgaccctcttcctctttccc
agccagtatgtggatgtggcctctttgggtctcgtgcctcagctcactggaggaaccctt
tacaaatacaacaatttccagatgcacatggatagccaacaatttttgaatgacctcaga
aatgatattgaaaagaaaataggatttgatgctattatgagggttcgtaccagcacaggt
ttcagagctaccgatttctttgggggaatttttatgaacaacaccactgatgtggaaatg
gcagccattgattgtgataaggcagtgactgtggagttcaagcatgatgacaaacttggt
gaagatagtggagccttaatccagtgtgctgtgctttacacaaccatcggaggtcagaga
agacttcggattcacaatcttagcttgaactgcagctcccaactggctgatctctataag
agctgtgagacagatgcccttatcaacttcttcgccaagtcagcatttaaagcagttcta
caccagcccttgaaggtcatccgggaaattctggttaatcagactgcccatatgttggca
tgttaccgaaagaattgtgcaagtccgtctgcagcaagccagcttattttaccagattcc
atgaaagtattaccagtgtacatgaattgtttgttaaaaaattgtgtgctgcttagcaga
ccagagatctcaacagatgagcgggcataccagagacagctggtcatgaccatgggtgtg
gctgactctcagcttttcttctatccccaacttctaccaatacacactttagatgtcaag
agtacaacacttcctgctgctattcgttgctctgagtcccgtctttcagaagaaggaata
ttcttattggctaatggtctaaacatgttcttatggttaggagttagtagcccaccagaa
ctggtccaaggaatatttaatgtgccatcctttgcacatgtcaacacagatatgacatta
ctgcctgaggttggaaacccatattctcaaacactcagaatgataatgagtattatccaa
caaaagaggccatattcaatgaagctgacaatagtaaagcagcgagagcagccagaaatg
gttttccgacagttcctggtagaagacaaaggactttatggaggatcttcttatgtggat
ttcctttgctgtgttcacaaagagatctgccagctgcttaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (28)   
   UniProt (1)   
   RefSeq(pep) (27)   
DNA sequence (27)   
   RefSeq(nuc) (27)   
Protein domain (7)   
   Pfam (7)   
All databases (89)   

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