KEGG   Canis lupus familiaris (dog): 478729
Entry
478729            CDS       T01007                                 
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03083  Polycomb repressive complex
cfa04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    478729 (JARID2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    478729 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cfa03036]
    478729 (JARID2)
Chromosome and associated proteins [BR:cfa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    478729 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     478729 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 478729
NCBI-ProteinID: XP_005640109
Ensembl: ENSCAFG00000009885
VGNC: 42181
UniProt: A0A8C0Z1I0 A0A8I3PIU6
Position
35:14425042..14685518
AA seq 1259 aa
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLPGSLKTVN
GLLGHGQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSSREKEPVQK
HKSKEATPGKEKHSDHRADSRREQASAAHPPAAPSTGSSAKGLAANHHHPPLHRSAQDLR
KQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKET
KPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHAVNGLKVSGRLNPKSCTK
EVGGRQLREGLRNSKRRLEEAQQAEKPQSPPKKMKGTAGPAEAPGRKAAAAPPTAPAPVE
KALLNGHVKKDVPERSLERNRPKRATAGKSAPGRQAHGKADSASCENRSTSQSEPLHKPH
EAAAAAAAAAAAAKPEKGGGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMC
RVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPL
IGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLS
YDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEHDYNKFHPLPRFEPKNGLINGVAHR
NGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYKGRSVSLTTFYR
TARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSR
HGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADC
IWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQF
VVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQ
AEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSNGAMADGKKKPR
KWLQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEE
QIISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSSSSSSKSASSSS
NT seq 3780 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaagaattc
aagaatgcccagaagaggcagcacggggaaggcctgcctgggagcctgaaaaccgtgaat
gggctccttggtcatggccagtctaagggattaggaccagcgtcagaacagtcagaaaat
gagaaggacgatgcctcccaagtgtcctctactagcaacgatgttagttcatcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgcccagtct
cagcccaacagccccagcacaactccagtgaagatagtggagcctttgctgcctcctcca
gctactcaaatttctgacctctctaaaaggaagcccaagacagaagattttctgactttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagctctcag
gacgaggaggacgtcgaggaggaagacgatgagacggaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaagcacgttcac
aacgggcatgttttcaatggttccagcaggtcatcacgggagaaagaacctgttcagaaa
cataaaagcaaagaggccactccggggaaggagaagcacagcgatcaccgggctgacagc
cggagggaacaggcttcagcggcccaccccccagcggccccgtccacgggttcctcggcc
aaggggctcgctgctaaccaccaccacccccctctgcatcggtcggctcaggacttacgg
aaacaggtttcgaaggtaaatggagtcactcgaatgtcatctctgggtacaagtgcaacc
agtgccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacactgct
acggtgactaaggggactgtcacatacaccaaagccaagagagaactggtcaaggaaacc
aaacccaatcaccacaagcccagttccgctgtcaaccacacaatctcagggaaaactgaa
agtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaagtccacc
gggcacgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaag
gaggtgggggggcggcagctgagggaggggctgcggaactccaagaggagactggaagag
gcacagcaggcagagaagccgcagtccccacccaagaagatgaaagggacggccggccct
gccgaagcgcccggcaggaaggcggcagcggcccccccgacggcgcccgccccggtggag
aaggccctgctcaacgggcacgtgaagaaggacgtgcccgagcggagcctagaaaggaac
cggccgaagcgggccacggccggcaagagcgcgccgggcagacaagcacacggcaaggcg
gacagcgcctcctgtgaaaatcgttctacctcgcaatcggagcccttgcacaagccccac
gaggcggcggcggcggcggcagcggcggcggcggcggccaagcctgagaaggggggcggc
cgggccggctgggcggccatggacgagatccccgtgctcaggccgtccgccaaggagttc
cacgacccgctcgtctacatcgagtcggtccgcgctcaggtggagaagtacggcatgtgc
agggtgatcccccctccagactggcggcccgagtgcaagctcaacgacgagatgcggttt
gtcacgcagattcagcacatccacaagctgggccggcgctggggccccaacgtgcagcgg
ctggcctgcatcaagaagcacctcagatctcagggcatcaccatggacgagctcccgctc
ataggaggctgcgagctcgacctggcctgctttttccggctgattaacgagatgggcggc
atgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatgctgcgcatcccc
aaaaccgcccaggaccggctggccaagctccaggaagcctactgccagtacctgctctcc
tacgactccctgtctcccgaggagcaccgccggctggagaaggaggtgctgatggagaag
gagatcctggagaagcggaaggggcccctggagggccacacggagcacgactacaacaag
ttccaccccctgccccgcttcgagcccaagaatggcctcatcaacggcgtggcccacagg
aacggcttccgcaccaagctcaaagaggtgggcccggcccagctcaagacgggccggcgg
cgactctttgctcaggaaaaggaagtggcgcgagaggaggaggaggacaaaggcgtcctc
agtgacttccacaagtgcatatacaagggaaggtctgtttctttaacgactttttatcga
acagcaagaaatatcatgaacatgtgctttagcaaggagcctgccccagctgaaatcgag
caagagtactggaggttagtggaagagaaggactgccacgtggccgtgcactgcggcaag
gtcgacacgaatacgcacggcagcgggttccctgtggggaagtcagaaccgttttcaagg
catggatggaacctcaccgtcctccccaataacacaggatccatcctgcgtcacctcggt
gctgtacctggagtgacaattccctggctaaacattggcatggtcttttctacctcatgc
tggtctcgagaccaaaaccaccttccctatattgactacttacacactggtgctgactgc
atttggtattgcattcctgctgaggaggagaacaagctcgaagacgtggtgcacacgctg
ctgcaggccaacggtaccccagggctgcagatgctggagagcaacgtcatgatctccccg
gaggtgctgtgcaaggaggggatcaaggtgcacaggaccgtgcagcagagtggccagttt
gtcgtctgcttcccgggctcctttgtgtccaaagtgtgctgcggctacagcgtctccgag
accgtgcacttcgccaccacccagtggacaagtatgggcttcgagacggccaaggaaatg
aagcgtcgccatatagccaagccattctccatggagaagttactctaccagattgcacaa
gcggaagcgaagaaggagaatggccccactctcagtaccatctccgcccttctggatgag
ctcagggatacggagctgcggcagcggcggcagctgttcgaggccggcctccactcgtcc
gcccgctacggcagccacgacagcaacggcgccatggcggatggcaagaaaaagcctcga
aagtggctgcagttggagacgtcggagaggaggtgtcaggtctgccagcacctgtgctac
ctgtccatggtcgtgcaggagaacgagaacgtggtgttctgtctggagtgcgccctgcgc
cacgtggagaagcagaagtcctgccgaggcctgaagctgatgtaccgctacgacgaggag
cagatcatcagcctggtcaatcagatctgcggcaaagtatctggtaagaacggcagcatc
gagaactgtctcagtaaacctacaccaaaaagagggccccgcaagagagcgaccgtggac
gtgccgccatcccggctttcatcctccagttcatccaaaagtgcttcgagctcgtcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (17)   
   UniProt (2)   
   RefSeq(pep) (15)   
DNA sequence (15)   
   RefSeq(nuc) (15)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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