KEGG   Canis lupus familiaris (dog): 478989
Entry
478989            CDS       T01007                                 
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03320  PPAR signaling pathway
cfa04659  Th17 cell differentiation
cfa04919  Thyroid hormone signaling pathway
cfa04920  Adipocytokine signaling pathway
cfa04928  Parathyroid hormone synthesis, secretion and action
cfa05200  Pathways in cancer
cfa05202  Transcriptional misregulation in cancer
cfa05207  Chemical carcinogenesis - receptor activation
cfa05216  Thyroid cancer
cfa05222  Small cell lung cancer
cfa05223  Non-small cell lung cancer
cfa05226  Gastric cancer
cfa05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    478989 (RXRG)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    478989 (RXRG)
   03320 PPAR signaling pathway
    478989 (RXRG)
   04919 Thyroid hormone signaling pathway
    478989 (RXRG)
   04928 Parathyroid hormone synthesis, secretion and action
    478989 (RXRG)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    478989 (RXRG)
   05202 Transcriptional misregulation in cancer
    478989 (RXRG)
   05207 Chemical carcinogenesis - receptor activation
    478989 (RXRG)
  09162 Cancer: specific types
   05226 Gastric cancer
    478989 (RXRG)
   05216 Thyroid cancer
    478989 (RXRG)
   05222 Small cell lung cancer
    478989 (RXRG)
   05223 Non-small cell lung cancer
    478989 (RXRG)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    478989 (RXRG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfa03000]
    478989 (RXRG)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cfa03310]
    478989 (RXRG)
Transcription factors [BR:cfa03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    478989 (RXRG)
Nuclear receptors [BR:cfa03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   478989 (RXRG)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 478989
NCBI-ProteinID: XP_005640900
Ensembl: ENSCAFG00000013336
VGNC: 45819
UniProt: A0A8C0T1Q9
Position
38:17922970..17968200
AA seq 504 aa
MQVISIDQLPIVIHVNQQKIIPSLILSCRQVLFEHLPSSRLSAGYHDGDHSRQVEIKSSP
GHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGPPLNALGSPYRVITSAMGP
PSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPGIGNMNYPSASPGSLVKHIC
AICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDKRQRNRCQYCRYQKC
LVMGMKREAVQEERQRSRERAESEADCANSGHEDMPVERILEAELAVEPKTESYGDMNLE
NSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSV
SVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNP
DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLETPLQIT
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgcaagtaatttctattgatcaactccctatcgtcatacacgttaatcaacaaaaaatt
atcccatctctgatcctgtcttgtcgtcaggtactttttgagcatctgccaagttccagg
ctcagtgctgggtaccatgatggtgaccattcacggcaagtggaaattaaaagctccccc
ggccactccggctccacgtccatgagcccgtcggcagccttgtccactgggaagcccatg
gacagccaccccagctacacggacacaccagtgagtgccccgcggactctgagtgcagtg
gggccccccctcaatgccctgggctctccatatcgagtcatcacgtctgccatgggcccg
ccctcgggagccctggcagcacctccaggaatcaacctggtcgccccgcccagctcccag
ctaaatgtggtcaacagtgtcagcatttcagaggacatcaagcccttgccagggcttcct
gggattggaaacatgaactacccatcagccagccctggctctctggttaaacacatctgt
gcaatctgtggggataggtcctcaggaaagcactacggtgtgtacagttgtgaaggctgc
aaagggttcttcaagagaaccataaggaaagacctcatgtacacgtgtcgcgataataaa
gactgcctcattgacaagcgccagaggaaccgctgccagtactgccgctaccagaagtgc
ctggtgatgggcatgaagagggaagctgtgcaagaagaaaggcagaggagccgggagcgg
gccgagagtgaggcagactgtgccaacagtggccatgaagatatgcctgtggagaggatt
ctagaagcggagcttgctgttgagccaaagacagaatcctatggtgatatgaacttggag
aactcgacaaatgaccctgtcaccaacatatgccatgctgctgataagcagctcttcact
cttgttgaatgggccaagcgcattccccacttctctgacctcaccttggaggaccaggtc
atcctgctccgggcagggtggaatgaattgctaattgcctccttctcccaccgctcggtc
tctgtccaggatggcattcttctggccacgggtttacacgtccaccggagcagtgcccac
agcgctggggttggctccatctttgacagagtcctgactgagctggtctccaaaatgaaa
gacatgcagatggacaagtcggagctggggtgcctgcgagccattgtgctgtttaaccca
gatgccaaggggctgtccaacccctcggaggtggagaccctgcgagagaaggtttacgcc
acccttgaggcctacaccaagcagaagtatccagaacaacctggcaggttcgccaagctg
ctgctgcgcctcccggccctgcgctccatcggcctcaagtgcctggagcacctcttcttc
ttcaagctcatcggagacacgcccatcgacaccttcctcatggagatgttggagaccccg
ctgcagatcacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (31)   
   UniProt (1)   
   RefSeq(pep) (30)   
DNA sequence (30)   
   RefSeq(nuc) (30)   
Protein domain (3)   
   Pfam (3)   
All databases (94)   

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