KEGG   Canis lupus familiaris (dog): 479256
Entry
479256            CDS       T01007                                 
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03020  RNA polymerase
cfa04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    479256 (POLR3A)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    479256 (POLR3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    479256 (POLR3A)
Enzymes [BR:cfa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     479256 (POLR3A)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     479256 (POLR3A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 479256
NCBI-ProteinID: XP_038348419
Ensembl: ENSCAFG00000015546
VGNC: 44800
Position
4:complement(27959412..28008179)
AA seq 1402 aa
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNICHYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVHLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQSEPALSKNELVLTTESIMKKTEFLC
CQDSFLQTLTETGYEKYNEEIKNFVKGISEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADR
DPSPPRRPLIFDTNEFHIPLVT
NT seq 4209 nt   +upstreamnt  +downstreamnt
atggtgaaggaacagttccgagagacggacgtggccaagaaaataagccacatctgtttt
ggaatgaagtcacctgaagagatgcgccagcaggcccacatccaggttgtgagtaagaac
ctgtacagccaggacaacaaccatgctcccttgctgtacggtgtgcttgaccataggatg
ggtacaagtgagaaggaccgtccttgtgaaacctgtgggaagaacttggctgactgtctg
ggccactacgggtatatcgacttggagttgccatgcttccacgtgggctacttcagagca
gttatcggcatcttacagatgatctgtaaaacctgctgccacatcatgctgtcccaggag
gagaagaagcagtttctggattatctgaagaggcccggcctgacctacctccagaaacgt
ggactaaagaagaaaatctctgataaatgccgaaagaagaacatctgccattactgtggc
gcttttaatggtaccgtaaagaaatgtggattgctaaagataattcacgagaaatacaag
accaacaaaaaagtggtggatcctatcgtatcgaattttcttcagtcttttgaaacagcc
atcgagcataacaaagaagtagaaccactgctgggaagagcacaggaaaacttaaacccc
ttagtagtactgaatttatttaaacggatcccggccgaagatgtccctctacttctaatg
aacccagaagccggaaagccgtctgatttgattctcacacgacttttagtgccccctttg
tgtatcagaccctccgtcgtgagtgatttgaagtctggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcttaaatgacgttatcaaaaagcatcgaatatcagga
gcgaagacccagatgatcatggaagactgggacttcctacagctgcagtgtgccctctat
atcaacagcgagctctcgggcattcccctcaacatggcacccaagaaatggactagagga
tttgtccagcgcctgaagggaaagcagggtcgatttagaggcaatctctcaggaaaaaga
gtggatttttctgggagaacagtcatctcacctgaccccaatctcaggattgatgaggta
gctgtgccagttcacgtggccaaaattcttacttttcctgaaaaggtgaataaagcaaac
atcaactttttgaggaaactggttcgaaatggccctgaagttcacccaggagccaatttc
attcagcagagacatacacagatgaaaaggtttttgaagtatggaaatagggaaaagatg
gctcaggagctcaagtacggggacattgtggagagacacctcatagacggagacgtggtg
ctgttcaaccggcagccctcactgcacaaactgagcattatggcgcatctggccaaggtc
aagccccatcggaccttcaggtttaacgagtgtgtctgtacaccctacaatgcagatttc
gatggtgatgagatgaaccttcatcttcctcaaacagaggaagctaaagcagaggccctt
gttttgatggggaccaaagcaaatctggtaacaccgaggaatggagaaccactgattgct
gctattcaggattttctaacaggtgcctatctcctcacccttaaggacactttctttgac
cgtgccaaggcttgccaaatcattgcttcgatactggttggcaaggatgagaaaattaaa
gttcatctcccaccccctacgatattaaagcctgtcaccctgtggacgggaaagcagatc
ttcagtgtcatcctcagacctagcgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaaaggagaagatctctgtgtcaatgattcctatgttactatc
cagaacagtgagttgatgagtggcagcatggacaagggaacactggggtcaggatccaag
aacaacattttttacattttgctgcgagactgggggcagaacgaagcggccgatgcaatg
tcgcggcttgccaggctggctcctgtctacctctcaaaccgtggattctcaattgggatt
ggtgatgtcacacctggtcaaggactgctcaaggccaagtatgagctgctgaatgctggc
tataaaaaatgtgatgagtacatcgaagccctaaacacaggcaagctgcaacagcagcct
ggttgcaccgctgaggagactctggaggctctgatcctgaaggagctatctgtgataaga
gaccatgctggcagcgcctgcctccgggaactggataagagcaacagcccgctcaccatg
gctctgtgcggctccaaaggttctttcattaacatatcacagatgattgcctgtgtggga
cagcaggccatcagtggctctcgagtgccagatggctttgaaaacaggtcgttgcctcac
tttgagaaacactcaaagctcccagctgccaaaggctttgtggcaaatagcttttattcc
ggcttgacaccaacagagtttttcttccacacaatggctggccgggaaggtctcgtcgac
acagctgtaaagacagcagaaacagggtacatgcagagaaggcttgtcaagtcccttgaa
gatctttgctcacagtatgacctgacagtccgaagctctacgggtgatattatccagttc
atttatgggggagatggcttggatcctgcagcaatggagggaaaagatgaaccgttagag
ttcaaaagagttctggacaacatcaaagcagtcttcccgtgtcagagcgaacctgcacta
agtaaaaatgaactggtcctgaccactgaatcaatcatgaagaagactgagttcctctgc
tgccaggacagcttcctgcagaccttaactgagacaggctatgagaaatataacgaggaa
ataaaaaatttcgttaagggcatttctgagaagatcaagaagaccagagataaatacggc
atcaatgacaacggcacaacagagccccgtgtgttgtaccagttggaccggatcaccccc
acccaaatcgaaaagttcctggagacctgcagggacaagtacatgagggcacagatggag
ccaggttctgcggtgggcgcgctgtgtgcccagagcattggcgagccgggcacccagatg
accctgaagactttccactttgcaggtgtggcctccatgaacatcaccctgggcgtgccc
cggatcaaagagatcatcaatgcttccaaggccatcagcactccaatcatcacggcacag
ctggataaggatgacgatgcggactacgcccgcctcgtgaagggcagaattgagaaaacc
ctcttgggagagatttcggagtatattgaagaagtatttcttccagatgattgctttatc
ctcgtcaagctctccctggaacggatcagacttctgagactagaagtgaacgctgagacg
gtgcggtattccatctgcatgtccaagctccgcgtgaagcctggcgatgtggctgttcac
ggcgaggctgtggtgtgtgtcacccccagagagaacagcaagagctccatgtactacgtg
ctgcagttcctgaaagaggatctccccaaggtggtggtacagggcatcccagaggtttcc
agagctgtcatccacatcgacgagcagagcggaaaggagaagtacaaactcctggtggag
ggtgataacctgcgggccgtcatggccacccacggtgtgaagggcacccgcaccacctcc
aataatacctatgaggtggagaaaactctgggcatcgaagctgcccggacaactatcatc
aacgaaatccagtacacaatggtcaaccacggcatgagcattgacaggaggcacgtgatg
ctgctgtctgacctgatgacctacaagggtgaagtcttgggcattacgaggttcggcctg
gccaagatgaaggagagcgtgctcatgctggcctcctttgagaagacagctgaccatctc
ttcgatgccgcctactttgggcagaaggactccgtgtgtggggtgtctgagtgcatcatc
atggggatccccatgaacattggaactgggctcttcaagctgctgcacaaggctgacagg
gacccaagccctcccaggagacccctgatcttcgacacaaacgaattccacatccctctt
gtcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (5)   
   Pfam (5)   
All databases (46)   

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