KEGG   Canis lupus familiaris (dog): 479435
Entry
479435            CDS       T01007                                 
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform 3 precursor
  KO
K06491  neural cell adhesion molecule
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03265  Virion - Ebolavirus and Lyssavirus
cfa04514  Cell adhesion molecules
cfa05020  Prion disease
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    479435 (NCAM1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    479435 (NCAM1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05020 Prion disease
    479435 (NCAM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    479435 (NCAM1)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cfa04515]
    479435 (NCAM1)
   04090 CD molecules [BR:cfa04090]
    479435 (NCAM1)
   00536 Glycosaminoglycan binding proteins [BR:cfa00536]
    479435 (NCAM1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cfa00537]
    479435 (NCAM1)
Membrane trafficking [BR:cfa04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    479435 (NCAM1)
Cell adhesion molecules [BR:cfa04515]
 Immunoglobulin superfamily
  NCAM1/2
   479435 (NCAM1)
CD molecules [BR:cfa04090]
 Proteins
  479435 (NCAM1)
Glycosaminoglycan binding proteins [BR:cfa00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   479435 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cfa00537]
 Others
  479435 (NCAM1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Ig_5 C1-set Ig_4 Ig_C17orf99 Ig_6 V-set_CD47 Adeno_E3_CR1 Pur_ac_phosph_N Collagen_bind_2
Other DBs
NCBI-GeneID: 479435
NCBI-ProteinID: NP_001010950
Ensembl: ENSCAFG00000013844
VGNC: 43636
UniProt: Q5I2D5
Position
5:complement(19817368..20113554)
AA seq 725 aa
MLQTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE
KLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMF
KNAPTPQEFREGEDAVIVCDVVSSLPPTIIWKHKGRDVILTKDVRFIVLSNNYLQIRDIK
KTDEGTYRCEGRILARGEINFKDIQVTVNVPPTVQARQSIVNATANLGQSVTLVCDAKGF
PEPTMSWTKEGEQIENKEDEKYIFSDDSSELTIRKVDKNDEAEYVCIAENKAGEQDASIH
LKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPTITWRTSTRNISSEEKTLDGHIVV
RSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQ
VNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA
VNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRALG
EEVWHFKWYDAKEANMEGIVTIVGLKPETTYAVRLAALNGKGLGEISTASEFKTQPVREP
SAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRAKLSSEWKPEIRLPSGSDHVML
KSLDWNAEYEVYVVAENQQGKSKAAHFVFRTSAQPTAIPATLGGCSASYTFVSLLLSAVT
LLLLC
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgctgcaaactaaggatctcatctggactttgtttttcctgggaactgcagtttctctg
caggtggatattgtccccagccaaggagaaatcagcgttggagaatccaaattcttccta
tgccaagtggcaggagatgccaaagataaagacatctcctggttctcccccaatggagag
aagctcactccaaaccaacaacggatctccgtggtgtggaatgatgactcttcctccacg
ctcaccatctacaatgccaacattgacgatgccggcatttacaagtgtgtggtcactggc
gaggatggcagcgagtcagaggccacggtcaacgtgaagatcttccagaagctcatgttc
aagaatgcaccaaccccacaagagttcagggagggggaagatgccgtgattgtgtgtgat
gtggtcagctctctcccaccgaccatcatctggaaacacaaaggccgagatgtcatcctg
actaaagacgtccgattcatagtcctgtccaacaactacctgcagatccgggacatcaag
aaaacagatgagggcacttatcgctgcgagggcaggatcctggcacggggagagatcaac
ttcaaggacattcaggtcactgtgaacgtgccacccaccgtccaggccaggcagagcata
gtgaatgccaccgccaacctcggccagtccgtcaccctggtgtgcgatgccaaaggcttc
ccagagcccaccatgagctggacaaaggagggggaacagatagagaacaaggaagacgag
aaatacatcttcagcgatgacagttctgagctgaccatcaggaaggtggataagaacgat
gaggcggagtacgtgtgcatcgccgagaataaggctggagagcaggatgcgtccatccac
ctcaaggtctttgcaaagcccaaaatcacttatgtagagaaccagaccgccatggagctg
gaggaacaagtcactctgacctgtgaagcctcaggagaccccatccccactatcacctgg
aggacatctacccgaaacatcagcagtgaagaaaagactctggacgggcacatagtggtg
cgtagccatgcccgcgtgtcatccctgaccctgaagagcatccagtacacagacgccgga
gaatatatttgcaccgccagcaacaccatcggccaggactcccagtccatgtatctggaa
gtgcaatatgcccccaagctgcagggccccgtggctgtgtacacttgggaggggaaccag
gtgaacatcacatgcgaggtgtttgcctaccccagtgccacaatctcgtggtttcgagat
ggtcagctgctgccaagctccaactacagcaatatcaagatctacaacaccccctccgcc
agctatttggaggtgaccccagactctgaaaatgattttggaaactacaactgtactgca
gtgaaccgcattggacaggagtctttggaattcatccttgtccaagcagacaccccgtct
tcaccatccatcgaccaggtggagccgtactctagcacagcacaggtgcagtttgatgaa
ccagaggccacaggtggggtgcccatcctcaaatacaaggctgagtggagagcactgggc
gaggaagtgtggcatttcaagtggtatgatgccaaagaagccaacatggagggcatcgtc
accattgtgggcctgaagcccgagaccacatacgctgtgcggctggcggccctgaatggc
aagggcctgggtgagatcagcacggcctccgagttcaagacacagccagtccgggaaccc
agcgcacctaagctcgaagggcagatgggcgaggatggaaactctattaaggtgaacctc
atcaagcaggatgacggcggctcccccatcagacactacctggtcaagtaccgagcgaag
ctgtcctcggagtggaaaccagagattcggctcccgtctggcagtgaccacgtcatgctc
aagtccctggactggaatgcagagtatgaggtctacgtggtagccgagaaccagcagggg
aagtccaaggcggctcattttgtgttcaggacctcagcccagcccacagccatcccagcg
accttgggaggctgctctgcgtcctacacttttgtctcattgcttctctctgcagtgact
ctgcttttgctctgttag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (17)   
   UniProt (1)   
   RefSeq(pep) (16)   
DNA sequence (22)   
   RefSeq(nuc) (16)   
   GenBank (3)   
   EMBL (3)   
Protein domain (16)   
   Pfam (16)   
All databases (75)   

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