KEGG   Canis lupus familiaris (dog): 480247
Entry
480247            CDS       T01007                                 
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03013  Nucleocytoplasmic transport
cfa03015  mRNA surveillance pathway
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    480247 (ACIN1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    480247 (ACIN1)
   03015 mRNA surveillance pathway
    480247 (ACIN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    480247 (ACIN1)
   03041 Spliceosome [BR:cfa03041]
    480247 (ACIN1)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     480247 (ACIN1)
Spliceosome [BR:cfa03041]
 Complex C
  Other components
   EJC/TREX
    480247 (ACIN1)
SSDB
Motif
Pfam: RSB_motif SAP RRM_1
Other DBs
NCBI-GeneID: 480247
NCBI-ProteinID: XP_003435139
Ensembl: ENSCAFG00000011427
VGNC: 37507
UniProt: A0A8P0NDC0
Position
8:complement(3319100..3354110)
AA seq 1339 aa
MWRRKHPSSSGGTRGVLSGNRGVDYGSGRGQLGTFQGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSISEEKGESDDDKPRKGERRSSRVRQARAAKLS
ECSQVTEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEEGQKSRDAPVLKQF
KEAEEGEEMPRVKPEEVIDERHQSIRSPEQEELERGGRVTRSQEEARRSHVARYQQEKEM
KTVSSLEEEKQTKTSKGLEEKSKSPSPPRLTEDLEKAPLVLQPEQNVGEEETPPPLLIKE
ASSPPPNTQLQTEEEIEPMEGPAPPVLTQLSPPNTDGEARELLISPHTVQLVGRLSPLSS
PADTKAESLAEKVSEESVLPLVQKSTLAECSTQKGLETESEKYVQPFPFKIEELAPAKGI
TEESLKQLSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSRSRSRSPDSSGSQS
HSSLRSKQRDVSRARTHTNPRGRSEMGSRSTSESRSRSRSRSRSRSASSNSRKSLSPGIS
RDSSTSYTETKDPSSGQEVATPPVPQLQVLEPKERTSTSSSIQVRRLSQPEPAEKHVTQR
LQPERGSPKKCEAEEAEPPAATQPQTSETQTAHLPESERIHHTVEEKEEVTMDTSENRPE
NEVPEPPVPIADQVSNDDRPEGSAEDEEKKESSMPKSFKRKISVVSATKGVPAGNSDTEG
GQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDET
ERNGDDGAHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPIPPQVSVEVALPP
PVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRP
FTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFL
CADYAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAV
REQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKA
QEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKE
REKEAERERTRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRETK
RHSRSRSRSTPVRDRGGRR
NT seq 4020 nt   +upstreamnt  +downstreamnt
atgtggagacggaaacacccgagcagttccggaggaacccggggagttctgagtggtaat
cgaggggttgactatggcagtgggcggggtcaactcggtacgttccaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagcgaagagcgggcagaagagcgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagttttataaagcagtat
ctggaaaagcagcaggagcttcttaggcagcgtctggaacgtgaagcccgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggaactcagcaga
cattcgcccagaaaaagctcctctatttctgaagagaaaggtgaatctgatgatgataaa
ccaaggaaaggagaaagacgatcatccagggtcagacaggcaagagcagctaaactctct
gagtgtagccaggtgaccgaggaggaagaggatcaagaaacaccttccagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaggaggaggaggaagaggaa
gaagaggaagaggaagaggagggacaaaaatctagggatgcacctgtcctgaaacagttt
aaggaagcagaagagggggaagagatgcccagagtaaaaccagaggaggtgatagatgag
agacaccaaagcataagatccccggaacaggaggagctagagagaggaggaagagttaca
aggtcccaggaagaagcgagaagaagtcatgtggccagatatcagcaggaaaaagagatg
aaaacagtttcttcccttgaagaagaaaaacaaacaaaaacttcaaaaggcttggaggaa
aaatcaaagtccccttcccctcctcgactgactgaagatctggagaaggctcctcttgtg
ctacaaccagagcaaaatgtcggtgaagaggaaactcctccgcctttacttatcaaggaa
gcatcttctccaccacctaatacacaactccagactgaagaagaaatagagcccatggaa
ggcccagctccccctgtcctcactcagctatctcctcctaatacagatggtgaggccagg
gagctattaatatctccacatactgttcagttggtgggacgcctgtctcctttgtcaagt
cctgcagacaccaaagcagaatctctagcagagaaagtgtcagaggagagtgtcctgcct
ctagttcagaaaagcacactagctgaatgctcaacccagaagggtcttgaaactgagtcc
gaaaaatatgttcaaccattcccttttaaaattgaggaattagcaccagccaaagggatc
accgaggaatctctgaaacagctgtctctggaacagaaggaaggtagaagggcttctcat
actcttctcccaagccacagattgaaacagtcagctgactcatcctcaagccgatcctcc
tcttcatcctccagttctagatcaagatctcgctctccggacagctcaggctctcagtct
cactcatctctaagatccaagcagagagatgtatctcgggcacgtactcataccaaccct
cgtggtagatctgagatgggctcccgatcaacatcagagtctaggtcacgttcccgttcc
cgttcccgttctcgttcagcttcaagcaacagcagaaaatctctgagccctggaatctcc
agggacagcagcaccagctacactgaaaccaaagatccctcttctgggcaggaggttgca
actccacctgtgccacaactgcaggtccttgagccaaaggagaggacttccacctcatcc
tctatccaagtgagacgtttgagccaacctgagccagctgaaaagcatgtgacccagagg
ttacaacctgagcgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagct
gccacacagccccaaacctcagagacccagactgctcacctaccagaatcagaaaggatt
catcacactgttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaa
aatgaggttccagaaccccccgtgcctattgcagaccaagtcagcaatgatgaccgccca
gagggcagtgctgaagatgaggagaagaaagagagctcgatgcccaaatcattcaagagg
aagatctccgttgtctcagctaccaagggggtgccagctggaaacagtgacacagagggg
ggccagcctggccggaagcggcgttggggagccagcacagccaccacacagaagaaaccc
tccatcagtatcaccaccgaatcactcaagagcctcatccccgacatcaaacccctggcg
gggcaggaggctattgtggatcttcatgctgacgactcccgaatctctgaggatgagaca
gaacgtaatggtgatgatggagcacatgacaaggggctgaagatatgccggaccgtcacc
caggtagtacctgcagagggtcaggagaatgggcagagggaagaagaggaagaagagaaa
gagcctgaagcagaacccccaatacctcctcaggtgtccgtagaggtggctctgccccca
cctgtggagcatgaagtaaagaaagtgactttaggagataccttaactcgacgttccatt
agccagcaaaagtctggagtttccattacaattgatgacccagtccgaactgctcaggtg
ccctccccgccccggggcaagatcagtaacatcgtccacatctccaatttggtgcgtccc
ttcactttaggccaactgaaggaattgttgggccggacaggaactctggtggaagaggcc
ttctggattgacaagatcaaatctcactgctttgtaacgtactcaacagtagaggaagca
gttgccacccgcacagctctacatggggtcaaatggcctcagtccaatcccaaattcctt
tgtgctgactatgctgagcaagatgagctggattatcaccggggcctcttggtggaccgt
ccctctgaaactaagacagaggagcagggggtaccacggcccctgcaccccccgccccca
cccccagcccagccaccacagcacccccgggcagagcagcgggagcaggagcgggcggtg
cgggaacagtgggcagagcgggaacgggaaatggagcggcgggagcgaactcgatcagag
cgtgaatgggatcgggacaaagttcgagaagggccccgctcccgatcacggtcccgtgac
cgccgccgcaaggaacgtgcgaagtctaaagaaaagaagagtgagaagaaagaaaaagct
caggaggaaccacctgccaaactgctggacgaccttttccgtaagaccaaggcagctccc
tgcatctactggctcccactgactgacagccagattgttcagaaggaggcagagcgggct
gaacgggccaaggagcgggagaagcggcggaaagagcaagaagaggaagagcaaaaggag
cgggagaaggaagcagaacgggaacggacccgacagctggagcgggagaagcggcgagag
cacagccgagagagggacagggaaagagagagggaaagggagcgtgacaggggtgatcga
gatcgggatagggagagggaccgggagcgaggccgggagagagaccgcagagaaaccaag
cgccacagcaggagccggagtcggagcacacctgtgcgggaccggggtgggcgccgctag

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