KEGG   Canis lupus familiaris (dog): 480477
Entry
480477            CDS       T01007                                 
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X2
  KO
K11650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03082  ATP-dependent chromatin remodeling
cfa04714  Thermogenesis
cfa05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    480477 (SMARCD2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    480477 (SMARCD2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    480477 (SMARCD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    480477 (SMARCD2)
   03036 Chromosome and associated proteins [BR:cfa03036]
    480477 (SMARCD2)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     480477 (SMARCD2)
Chromosome and associated proteins [BR:cfa03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    480477 (SMARCD2)
   PBAF complex
    480477 (SMARCD2)
   GBAF(ncBAF) complex
    480477 (SMARCD2)
SSDB
Motif
Pfam: SWIB
Other DBs
NCBI-GeneID: 480477
NCBI-ProteinID: XP_005624308
Ensembl: ENSCAFG00000012708
VGNC: 46538
UniProt: A0A8C0T104
Position
9:complement(12747367..12783601)
AA seq 456 aa
MSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGL
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFSPSKAEGDNAGTAGPPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKS
LVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDP
RLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPM
KLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIAS
LDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRA
AFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtcaccggggagccggatgcccatggctggcttgcaggtgggaccccccgccggctcc
ccatttggcacagctgctccacttcgacctggcatgccacccaccatgatggacccattc
cgaaaacgcctgctggtgccccaggcccagcccccaatgcccgcccagcgccgggggcta
aagaggaggaagatggcagataaggttctacctcagcgaattcgggagcttgtcccagag
tctcaggcgtacatggatctcttggcttttgagcggaagctggaccagaccattgcccga
aagcggatggagatccaagaggccatcaaaaagcctctgacgcaaaaacgaaagctgcgc
atctatatttccaatacgttcagccccagcaaggcagaaggcgataatgcgggcaccgcg
gggccccctgggggaacccctgcaggggacaaggtggcttcctgggaactccgagtggag
ggaaaactgctggatgatcctagcaaacagaagaggaagttttcttcattctttaagagt
ctcgtcattgagctggacaaagagttatatgggcctgacaaccacctggtggagtggcac
cggatgcccaccacccaggagactgatggcttccaggtcaaacggcctggagacctcaac
gtcaagtgcaccctcctgctcatgctagatcatcagcctccccagtacaagttggacccc
cgactggcaaggctgctgggggtgcacacacagacaagggcggccatcatgcaggctctt
tggctttatatcaaacacaaccaactgcaggatgggcacgagcgcgagtacatcaattgc
aaccgttacttccgccagatcttcagttgtggccgacttcgtttctctgagattcccatg
aagctggctgggttgctgcagcatccagaccccattgtcatcaaccatgtcattagcgta
gaccctaacgaccagaagaagacagcatgttacgacattgatgtggaggtagacgaccca
ctcaaggcccagatgagcaattttctggcctctaccaccaatcagcaggagattgcctcc
ctcgatgtcaagatccatgagaccattgagtccatcaaccagctgaagacccagagggat
ttcatgctcagctttagcacggaccctcaggacttcatccaggaatggctccgttctcag
cgccgagacctcaagatcatcactgatgtgattgggaatcctgaggaggagagacgagct
gctttctaccaccagccctgggcccaggaagcagttgggaggcacatctttgccaaggtg
cagcagcgaaggcaagaactggaacaggtgctgggaatccgcttgacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (21)   
   UniProt (1)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (1)   
   Pfam (1)   
All databases (58)   

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