KEGG   Canis lupus familiaris (dog): 481947
Entry
481947            CDS       T01007                                 
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X3
  KO
K24501  PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfa03000]
    481947 (PRDM1)
Transcription factors [BR:cfa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    481947 (PRDM1)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 zf-C2H2 SET zf-C2H2_4 zf-C2H2_6 zf-C2H2_jaz zf-met zf-C2HE
Other DBs
NCBI-GeneID: 481947
NCBI-ProteinID: XP_005627729
Ensembl: ENSCAFG00000003694
VGNC: 44944
UniProt: A0A8P0S9C1
Position
12:63258691..63282613
AA seq 822 aa
MRDLCSETRAGTPSAAPKCSSSAVRSPRLSDGTMKMDMEDADMTLWTEAEFEEKCTYIVN
DHPWDCGADGGASVQAEASLPRNLLFKYGPSSKEVIGVVSKEYIPKGTRFGPLIGEIYTN
DTVPKNANRIYFWRIYSRGELLHFIDGFNEEKSNWMRYVNPARSAREQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMSLTQTQSHPKQPGAEKNDLCPKNA
PKREYSVKEILKLDSHPPRGKDCYRSNISPFAAERDADDLGKNGSPEMPFYPRAVYPSRV
PLPEDFLKAYGMERPTYIARSPLPSSTTPSPSARSSPDQSLQSCSPHSSPGDTVSPLAPC
GPDHRDSYAYLNAPYGPEGLGAYPGFAPGPPLPPAFLPSYNAHYPKFLLPPYGVGCPGLG
GVGGVGGLSLFPRLYPVYGGLLGGGGGGGGGGGGLPHPLLGPASLPGSLPSDAARRPLQP
DHARQVLIPAPHSAFSLPAAAASMKDRASSPASGSPTAGTAASAEHVVQPHATSAALAAP
GGDEAVNLMKSKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGER
PFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQC
KVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGNCPVAPATGMPLE
DLTRINEEIEKFDISDNADRLEDMEDIDVTSVVEKEILAVVRKEKEETGLKVSLQRNMGN
GLLSGCSLYESSDPSLMKLAHSNPLPLGPVKVKQETVEPMDP
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgcgggacctctgctccgagacgcgcgcggggacgccctcggctgccccgaagtgtagc
tccagtgctgtgaggtctccccggttgagcgacgggaccatgaaaatggacatggaggac
gcagacatgactctgtggacagaggccgagttcgaggagaagtgtacctacattgtgaac
gaccacccctgggactgcggcgccgacggaggggcctcggtgcaggcagaggcatccctc
cccaggaacctgctcttcaaatatggcccgagcagcaaagaggttattggagtagtgagt
aaagaatacataccaaagggaacacgttttggacccctaataggtgaaatctacaccaat
gatactgttcccaagaatgccaacaggatatacttttggcggatctattccagaggggag
cttctccacttcatcgatggctttaatgaggagaaaagcaactggatgcgctatgtgaat
ccggcgcgctctgcccgggagcaaaacctggctgcgtgtcagaacgggatgaacatctac
ttctacaccattaagcccatccctgccaaccaggagcttcttgtgtggtattgtcgggac
tttgcagagaggcttcactacccttatcccggagagctgacaatgatgagtctcacgcaa
acccagagccatccgaagcagcccggcgccgagaagaatgacctgtgccccaagaacgcc
ccaaagagggagtacagcgtcaaagagatcctgaagttggactcgcacccccccaggggg
aaggactgctaccgctccaacatttcacccttcgccgccgagagggacgccgacgacctc
ggaaaaaacgggagccccgagatgcccttctacccccgggccgtgtacccgagtcgggtc
cctctgcccgaggactttctgaaagcctacgggatggagaggcccacctacatcgcccgc
tcgcccctgccgtcctccaccaccccgagcccctcggcgagaagcagccccgaccagagc
ctccagagctgcagcccgcacagcagccccggcgacaccgtgtcgcccctggcgccctgc
ggccccgaccaccgggactcgtacgcctacttgaacgccccctacgggcccgagggcctg
ggcgcctacccggggttcgcgccgggcccgcccctgccgcccgccttcctcccgtcctac
aacgcccactaccccaagttcctcctgcccccctacggcgtcggctgccccggcctgggc
ggcgtgggcggcgtgggcggcctgagcctcttcccgcggctgtacccggtgtacggcggc
ctcctgggcggcggcggcggcggcggcggcggcggcggcggcctcccgcaccccctgctc
ggcccggcctcgctgcccggctcgctgccctcggacgcggcgcgcaggccgctgcagccc
gaccacgcgcgccaggtgctcatccccgcgccgcacagtgccttctccctgcccgccgcg
gccgccagcatgaaggaccgggccagcagccccgccagcggctcgcccaccgccggcacg
gccgcctcggcggagcacgtggtgcagccccacgctacctcagcggcgctggcggccccc
ggcggcgacgaagccgtgaatctcatgaaaagcaaaagaaacatgaccggctacaagacc
ctgccctaccccctcaagaagcagaacggcaagatcaagtacgagtgcaacgtgtgcgcc
aagacgttcgggcagctctccaacctcaaggtccaccttagagtgcacagcggagagcgg
cctttcaaatgccagacttgcaacaagggcttcactcagctcgcccacctgcagaaacac
tacctggtacacacgggagagaagccacatgaatgccaggtttgccacaagcgatttagc
agcaccagcaatctcaagacccacctgcgactccactctggagagaaaccttaccagtgc
aaggtgtgccctgccaagttcacccagtttgtgcacctgaaactccacaagcgcctacac
acccgggagcggccccacaagtgtgcccattgccacaagagctacatccatctctgcagc
ctcaaggtccacctgaaggggaactgtcctgtggccccagccacagggatgcccttggag
gatctgacccggatcaacgaagaaatcgagaagtttgacatcagtgacaatgccgaccgg
ctggaggacatggaggacatcgacgtgacctctgtggtggagaaggaaattctggctgtg
gtcagaaaagagaaagaagaaactggcctgaaagtgtctttgcaaagaaacatggggaat
ggactcctctcagggtgtagcctttatgagtcatcagacccatccctcatgaagttggct
cacagcaacccactacctctggggcctgtaaaggtcaaacaggaaacagttgaaccaatg
gatccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (9)   
   Pfam (9)   
All databases (53)   

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