KEGG   Canis lupus familiaris (dog): 484908
Entry
484908            CDS       T01007                                 
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1
  KO
K09173  regulatory factor X 1/2/3
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfa03000]
    484908 (RFX1)
Transcription factors [BR:cfa03000]
 Eukaryotic type
  Other basic domains
   RF-X
    484908 (RFX1)
SSDB
Motif
Pfam: RFX1_trans_act RFX_DNA_binding
Other DBs
NCBI-GeneID: 484908
NCBI-ProteinID: XP_005632859
Ensembl: ENSCAFG00000016511
VGNC: 45503
Position
20:48362531..48393495
AA seq 973 aa
MATPAYVTELQAAPQPSQPPQAQPQPPPPPPAAPQPPQPPATAATPQPQYVTELQSPQPQ
AQPPGSQKQYVTELPATPTPSQPAGAPTPSPASQQYIVVTVSEGAMRASETVSEASPGST
ASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVPQQALPTQRLVVQSTA
PGSKGGQVSLTVHGTQQVHSPPERSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQSVPVT
QERSVVQATPQAPKAGPVQQLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGGDAS
YTASAIRSSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMYVSGSQ
VVTSSTSSGGGASNSSSGSSGGGGGGGGGGGGSGGGSGGGSSGAGTYVIQGGYMLGSASQ
SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS
VFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKM
EGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLPDFSELDLQGKVLPEGVGPGDIK
AFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPKAS
LVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAM
VNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANV
QEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAA
KLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVM
GEFANLTTSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPDALEPPAKLART
DARGLFVQALPSS
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggcaacaccagcgtacgttactgagctacaggcagccccgcaaccatcccagccacca
caggcccagccccagccaccgccgccgccaccagcggcaccccagcccccccagccgcct
gccaccgctgctaccccccagccccaatatgtcactgagttgcagagcccccagccccag
gcacagccaccaggcagccagaaacaatatgtgacggagcttccggccacccccacgccc
tcacagccggccggcgcacccaccccgtccccggcgtcccagcagtacatcgtggtcacc
gtgtctgaaggcgctatgcgggccagtgagactgtatcggaggccagcccaggctccaca
gccagccagaccggagtgcccactcaggtggtccagcaggtgcagggcacccagcagcgt
ctgctggtccagacaagtgtgcaggccaagccgggccatgtgtcacccctccagctcacc
aacatcccagtaccccagcaggctctccccacacagcgtctggtggtgcagagcacagcc
ccaggcagcaagggtggccaggtttccctgacagtgcatggcacccagcaggtgcactca
ccccctgagcggtcaccggtgcaagccaacagctcctccagcaagacggctggggccccc
acgggcacagtgccgcagcagctgcaagtccatggtgttcagcagagtgtccccgtcacc
caagagaggtcggtggtccaagccactccacaggcccccaaagccggccctgtgcagcag
ctcacagtgcaggggctccagccggttcacgtggctcaagaggtgcagcagctgcagcag
gtgcctgtcccacacgtgtactccagccaagtgcagtatgtggagggcggtgacgccagc
tacacggccagtgccatccgctccagtacctacccctacccggagacgccgctgtacacc
cagacagcgggcaccagctactacgaagctgcgggcacagccgcccaggtcagcacaccc
gccacctcccaggcggtggccagcagcggctctgtgcccatgtatgtgtccggcagccag
gtcgtcaccagctccaccagcagcggaggtggggccagcaacagcagcagtggcagcagt
ggcggcggtgggggaggcggcggcgggggtggtggcagtggtggcggcagcggaggcggc
agcagcggagcaggcacctatgtgatccagggcggctacatgctgggcagtgccagccag
tcctactcccacaccacccgtgcctcgccagccaccgttcagtggctcctagacaactat
gagacggcggagggtgtgagcctgccgcggagcaccctctactgccactacctgctgcac
tgccaggagcagaagctggagcccgttaacgccgcttcctttggcaagctcatccgctct
gtcttcatgggcctgcgcacccgacgtcttggcaccaggggtaactccaagtaccactac
tatggcctgcgcatcaaggccagctcgcccctgctgcgactgatggaggaccagcagcac
atggccatgcggggccagcccttctcgcagaagcagagactcaagcctatccagaagatg
gagggcatgaccaacggtgtggccgtggggccgcagcaggctaccgggctgtccgacatc
agcgcccaggtccagcagtaccagcagttcctggatgcctcgcggagtctccctgacttc
tcagagcttgacctccagggcaaagtgctccctgagggtgtcgggcctggggacatcaag
gccttccaggtcctgtaccgggaacactgtgaggccattgtcgatgtcatggtgaacctg
cagttcacactggtggagacgctgtggaaaaccttctggaggtacaacctcagccagccc
aacgaggcgcctccgctggccgtgcatgatgaggctgagaagcggctgcccaaggccagc
ctggtgctcctctccaagtttgagccagtgctgcagtggaccaagcactgtgacaacgtg
ctgtaccagggcctggtggagatcctcatccctgacgtactgcggcccatccccagtgcc
ttgacccaagcgatccggaactttgccaagagcctggagagctggctcacccatgccatg
gtgaacatccctgaggagatgctgcgtgtgaaggtggcagcggccggcgccttcgcgcag
acgctgcgacgctacacgtcgctcaaccacttggcgcaggcggctcgggccgtgctgcag
aacaccgcgcagatcaaccagatgctgagcgacctcaaccgcgtggacttcgccaacgtg
caggagcaggcctcgtgggtgtgccgctgcgaggaccgcgtggtgcagcggctggagcag
gacttcaaggtgaccctgcagcagcagaactcgctggagcagtgggcggcctggctggac
ggcgtcgtgagccaggtgctcaagccctaccagggcagcgccggcttccccaaggccgcc
aagctcttcctcctcaagtggtccttctacagctccatggtgatccgggacctgaccctg
cgcagcgctgccagctttggttctttccacctcatccggctgctctacgacgagtacatg
tactacctgatcgagcaccgcgtggcccaggccaagggcgagacccccatcgcggtcatg
ggcgagttcgccaacctgaccacctcgctgaaccccctagacccggacaaagacgaggag
gaggaagaggaggaggagagcgaggatgagctgccgcaggacatctcgctggcggccggc
ggcgagtcgcccgcgctgggccctgacgccctggagccgccggccaagttggcacggaca
gacgcgcgtggcctcttcgtgcaggcgctgccctccagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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