KEGG   Canis lupus familiaris (dog): 485055
Entry
485055            CDS       T01007                                 
Symbol
CACTIN
Name
(RefSeq) cactin
  KO
K25058  cactin
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfa03041]
    485055 (CACTIN)
Spliceosome [BR:cfa03041]
 Complex C
  Other components
   Complex C specific factors
    485055 (CACTIN)
SSDB
Motif
Pfam: Cactin_mid CactinC_cactus
Other DBs
NCBI-GeneID: 485055
NCBI-ProteinID: XP_542173
Ensembl: ENSCAFG00000019208
VGNC: 38653
Position
20:55528852..55542830
AA seq 752 aa
MGRDTRSRSRSAGRRRRRQRSGSRSRSRSGSHGRRSRRRRDDEVRRRRRRQSRERRSDSE
EERWQRRRRPSPSPLPPRWRSQDRSSQSDSDEERQEQQRRRWARRRRTHSWSPGSSASSS
ASPDRSQSPREAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKE
RKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQE
DNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKI
RIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGK
NADFWRDMTTITEDEIAKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYSQLQVIF
QGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEP
LFPILKQEPPSPGHSLEPEDPAPTPPGPSSEGGSAEPEAEGAAPVEGEADGEAVLMEEDL
IQQSLDDYDAGKYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASESAEDIF
FRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFD
NPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACPDNKDFATLRFHAGPPYEDIAFKIVNR
EWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgggtcgggacacacgctcgcgctcgcggtcggctggtcgcaggcgccgcaggcaacgg
agcgggagtcggagccgaagtcgaagcgggagccatggacggcgaagccgccggcgccgg
gacgacgaagtacggcgcaggcggaggcggcagagccgggagcgcaggtcagattcggag
gaagaaaggtggcagcgacgaaggaggccgagcccaagcccactgccaccacgatggcgc
tcacaggaccggtcctctcagtccgactcggatgaggaacggcaggagcagcagcggcgc
cgatgggcccgccggcgacggacacattcttggtccccgggctcctcggcatccagctcg
gcctccccagaccgctcccagagccctcgggaggcggcggcagccctgagccagcagcag
agcttgcaggagcggctgcggctgcgggaggagcggaagcagcaggaggagctcatgaag
gccttcgagactcccgaggagaaacgggcccggcggctggccaagaaggaggccaaggag
aggaagaagcgggagaagatgggctggggggaggagtacatgggctacaccaacaccgac
aaccccttcggcgacaacaatctcctgggcaccttcatctggaacaaggccctggaaaag
aaggggatcagccacctggaggagaaggagctgaaggagcgcaacaagagaatccaggag
gataatcgtctagagctgcagaaggtgaagcagctgcgactggagcgggagcgggagaag
gccatgcgggagcaggagctggagatgctgcagcgggagaaggaggcagagcacttcaag
acgtgggaggagcaggaggacaacttccacctccagcaggccaagctgcgctccaagatc
cgcatccgggacgggcgggccaagcccattgacctgctggccaagtacatcagcgccgag
gacgatgacctggctgtggagatgcacgagccatacaccttcctcaacggcctcaccgta
gcggatatggaggacctgctggaggacatccaggtgtacatggagctggagcagggcaag
aacgcagacttctggcgggacatgaccaccatcacagaggatgagatcgccaagctgcgc
aagctggaagcgtcgggcaagggcccaggagagcggcgagagggggtcaatgcctcggtc
agctctgacgtgcagtcggtcttcaaggggaagacgtacagccagctgcaggtcatcttc
cagggcatcgagggcaaaatccgggcagggggccccaacctggacatgggctactgggag
agcctcctgcagcagctccgtgcccacatggcgcgcgccaggctccgagagcgccaccag
gacgtgctgcgtcagaagctctacaagctgaagcaggagcagggcgtggagagcgagcct
ctgtttcccatcctcaagcaggagcccccgtcccctggccacagcctggagcctgaggac
ccggcaccgaccccgccaggaccctcctcggaaggcggctctgcggagcctgaggcggaa
ggggcggcacccgtggagggtgaggcggacggggaggccgtgctcatggaggaggacctg
atccagcagagcctggatgactacgacgccggcaagtacagcccccggctgcttacagcg
cacgagctgccactggacgcccacgtgctggagcccgacgaggacctgcagcgcctgcag
ctgtcccgccagcagctccaggtcacaggcgacgccagcgagagtgcggaggacatcttc
ttccggcgggccaaggagggcatgggccaggacgaggcgcagttcagcgtggagatgccg
ctgacgggcaaggcctacctgtgggccgacaagtaccggccccgcaagccgcgcttcttc
aaccgcgtgcacacgggcttcgagtggaacaagtacaaccagacgcactacgacttcgat
aacccgccgcccaagatcgtgcagggctacaagttcaacatcttctaccccgacctcatc
gacaagcgctccacgcccgagtacttcctggaggcgtgccccgacaacaaggacttcgcc
acgctgcgcttccacgctgggccgccctacgaggacatcgccttcaagatcgtcaaccgc
gagtgggagtactcccaccggcacggcttccgctgccagttcgccaacggcatcttccag
ctctggttccacttcaagcgctaccgctaccggcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system