KEGG   Canis lupus familiaris (dog): 486283
Entry
486283            CDS       T01007                                 
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
  KO
K18493  LIM homeobox protein 5
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    486283 (LHX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfa03000]
    486283 (LHX5)
Transcription factors [BR:cfa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    486283 (LHX5)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 486283
NCBI-ProteinID: XP_543409
Ensembl: ENSCAFG00000009121
VGNC: 42666
UniProt: A0A8C0TNM7 A0A8I3PGV3
Position
26:complement(10901082..10909374)
AA seq 402 aa
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFGGGPSPPFPMSGAGGYSGPLAHPNPELNEAAVW
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatggtgcactgtgccggctgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaacgacttcttcaggcgtttc
ggcactaagtgtgccggctgtgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcagtaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtcatcgacgaaaacaagtttgtgtgcaaggatgactacctg
agctcctccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacccgctccaggacgaccccaaggagacagacaactcgacg
tcgtcggacaaggagacggccaacaacgagaacgaggagcagaactcgggcacgaaaagg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgcctttgcc
gccactcccaagcccacgcgccacatccgcgaacagttggcacaggagaccggcctcaac
atgcgcgttatccaggtgtggttccagaaccgaaggtccaaagaacgcaggatgaaacag
ctgagcgcactgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactaccaaggcgactactacgcgcccggaggcaactacgacttcttcgcccacggcccg
ccgtcgcaggcgcagtccccggccgactcgagcttcctggccgcgtcggggcccggctcc
acgccgctgggcgccctggagccgccgctggccggcccgcacgccgccgacaacccccgc
ttcaccgacatgatctcgcacccggacacgcccagccccgagcccggcctgcccggcgcg
ctgcaccccctgcccggcgaggtgttcggcggcgggcccagcccgcccttccccatgagc
ggcgcgggcggctacagcggacccctggcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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