KEGG   Canis lupus familiaris (dog): 486699
Entry
486699            CDS       T01007                                 
Symbol
APOBEC1
Name
(RefSeq) C->U-editing enzyme APOBEC-1
  KO
K16932  C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    486699 (APOBEC1)
Enzymes [BR:cfa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.36  mRNA(cytosine6666) deaminase
     486699 (APOBEC1)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     486699 (APOBEC1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     486699 (APOBEC1)
SSDB
Motif
Pfam: APOBEC4_like APOBEC1 SNAD4 NAD1 APOBEC2 APOBEC_N NAD2 APOBEC4 APOBEC3 APOBEC_C dCMP_cyt_deam_1 Toxin-deaminase Bd3614-deam
Other DBs
NCBI-GeneID: 486699
NCBI-ProteinID: XP_005637246
Ensembl: ENSCAFG00000013901
VGNC: 37995
Position
27:9502214..9513600
AA seq 236 aa
MASDKGPSAGDATLRRRIEPWEFEGFFDPRELRKETCLLYEIQWGTSHKTWRNSGKNTTN
HVEINFMEKFAAERQYCPSIRCSITWFLSWSPCWECSNAIRGFLSQHPSVTLVIYVARLF
WHTDPQNRQGLRDLINSGVTIQIMTVPEYDHCWRNFVNYPPGKEDHWPRYPVLWMKLYAL
ELHCIILNLPPCLKISRRNQHQLTLFRLTLQDCHYQTIPPPILLDMGLIQPLVTWR
NT seq 711 nt   +upstreamnt  +downstreamnt
atggcttctgacaaaggtccttcagctggagatgccaccttgaggaggagaattgaaccc
tgggaatttgaaggcttctttgaccctagagaactccgtaaagagacctgcctcctctat
gaaatccagtggggcacaagccataagacctggcgaaactcaggcaaaaacaccaccaac
catgtggaaatcaattttatggaaaagtttgctgcagaaagacagtattgcccatccatt
cgctgctccatcacctggttcctgtcctggagtccctgttgggaatgctccaatgctatt
aggggatttttgagtcaacaccctagtgtgactctggttatttatgtggcccggcttttc
tggcacacggatccacaaaaccggcaaggactcagggatctcattaatagtggtgtgact
atccagattatgacagtcccagagtatgatcactgctggaggaattttgtcaactaccca
cctgggaaagaagatcactggccaagataccctgttctatggatgaagctatatgcactg
gaacttcactgcataattctaaatctccctccctgtttaaagatttcaagaagaaatcag
catcagcttacattgttcagacttactcttcaagactgccattaccaaacaattccacct
cctatccttttagatatggggttgatacaacctcttgtgacttggagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (13)   
   Pfam (13)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system