KEGG   Canis lupus familiaris (dog): 487178
Entry
487178            CDS       T01007                                 
Name
(RefSeq) protocadherin beta-15 isoform X1
  KO
K16494  protocadherin beta
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cfa04515]
    487178
Cell adhesion molecules [BR:cfa04515]
 Cadherins
  Protocadherins
   487178
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 Cadherin_4
Other DBs
NCBI-GeneID: 487178
NCBI-ProteinID: XP_005617354
UniProt: A0A8P0TJF9
Position
2:33302959..33323542
AA seq 795 aa
MEAGGECFPEQRQVLILFLLLGEALAGWESRRYSVMEETESGSFVANLAKDLGLGVGELA
ARGARVVSEDNEPGLQLDLQTGELVLSEKLDREEMCGSTDPCVMHFQVLLKNPLGVFRAE
LLVRDINDHSPEFPEREMTLKILETSPPGTVFALKKAQDLDVGNNNIQNYSISPNSHFRV
STRTRGDGRKYPELVLVKELDREEQAELRVTLTALDGGSPPRSGAAQVRILVLDVNDNAP
EFVQKLYQVQVPENSPVGMLVVKVSARDLDTGTNGEISYSYFYSSQEISTTFELNNFSGE
VRLIKKLDFETISSYELEIEASDGGGLSGRCSVSIEVVDVNDNFPELTISSLTSPIPENS
PETEVALFRVRDRDSGDNGKMTCCIQDDLPFLLKPSEENFYTLVTNGALDRESQAEYNIT
ITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDA
GANAQVTYSLLPPRDPHLPLASLVSINADNGQLFALRSLDYEALQAFEVRVGAADRGSPA
LSSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLLVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLCSALAFVAVRLCRRSGAA
SGGGCAVPEGHFPGHLVDVSGAGTLSQSYQYEVCLAGGTGTSEFKFLKPIFPNIVSHDLG
RKSEGNPTFQSNFPE
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggaggccggaggggagtgctttcctgaacaaaggcaagtcctgattctctttctcctg
ttgggagaggctctggcaggctgggaatcccgtcgctattccgtgatggaggaaacagag
agtggctcatttgtggccaacctggccaaggacctgggactgggagtaggggagctggca
gcgcggggagcccgggtggtctctgaggataacgaacccggcttgcagcttgatctgcag
accggggagttggtattaagtgagaaactggatcgggaggagatgtgcggctctacagat
ccatgtgtaatgcatttccaagtgttactgaaaaacccattgggagtatttcgggctgag
ctactggtgagagatataaatgatcattctcccgaatttcctgaaagagaaatgactctg
aaaatcctggagacaagccctcctgggactgtgtttgctttgaaaaaagcccaggacttg
gacgtgggcaacaacaacatccaaaattacagcatcagtcccaactctcatttccgtgtt
tctacccgcaccagaggggatggtaggaaatacccagaactggtactagtcaaagagctg
gatcgggaggagcaggctgagctcagagtaactctcacagcgctggatggcggctctcca
ccccggtctggtgctgctcaggttcgcatcttggtcttggacgtcaatgacaatgcccct
gagtttgtacagaaactctaccaggttcaagttccagagaacagccctgtgggcatgcta
gttgtcaaggtctctgctagagatttagacactgggacaaatggggagatatcctactcc
tatttttatagttctcaggagataagtacaacttttgagctaaacaacttttcaggagaa
gttcgactgattaaaaaactagattttgagacaatatcttcatatgagctggaaatagaa
gcatctgatggtggagggctttctggaagatgctctgtctccattgaggtggtggatgtt
aacgataacttcccagaactaactatttcatcactcaccagccccattcctgaaaattct
ccagaaacagaggtagccctgtttagagttcgagatcgagactctggggacaacggaaag
atgacttgctgcatccaggatgatctccctttcctcctgaaaccatcagaagagaatttc
tataccttagtaacaaatggggcgctggacagagagagccaggcggagtacaacatcacc
atcaccgtcagtgacctggggacccccaggctgaaaacccagcacaacatcaccgtgacg
gtctccgacgtcaacgacaacgcccccgccttcagccagaccacctacaccctgcgcgtc
cgcgagaacaacagccccgccctgcacatcggcaccgtgagcgccaccgacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgccccgggacccgcacctgccgctc
gcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggac
tacgaggcgctgcaggccttcgaggtccgcgtgggcgcggccgaccgcggctcgcccgcg
ctgagcagccaggcgctggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccgcgggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaggcacaggctg
ctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgag
gcccgggccgacccgctcaccgtctacctggtcatcgccttggcgtccgtgtcgtcgctc
ttcctgtgctcggcgctggcgttcgtggcggtgcggctgtgcaggaggagcggggcggcg
tcggggggtggctgcgcggtgcccgagggccactttccgggccacctggtggacgtcagc
ggcgcggggaccctgtcccagagctaccagtacgaggtgtgtctggcgggagggactggg
accagcgagttcaaattcttgaagccgattttccccaatattgtaagccacgatcttggg
aggaagtcagagggaaatccaaccttccaatccaactttccggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (30)   
   UniProt (1)   
   RefSeq(pep) (29)   
DNA sequence (29)   
   RefSeq(nuc) (29)   
Protein domain (5)   
   Pfam (5)   
All databases (81)   

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