KEGG   Canis lupus familiaris (dog): 487508
Entry
487508            CDS       T01007                                 
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
  KO
K20826  RNA polymerase II-associated protein 1
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    487508 (RPAP1)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     487508 (RPAP1)
SSDB
Motif
Pfam: RPAP1_C RPAP1_N
Other DBs
NCBI-GeneID: 487508
NCBI-ProteinID: XP_005638334
Ensembl: ENSCAFG00000009577
VGNC: 45706
UniProt: A0A8I3Q7V9 A0A8C0TVW7
Position
30:complement(8611972..8629884)
AA seq 1394 aa
MLSRPKPGESEVDLLRFQSQFLAAGAAPAVQLVKKGNRRGGDTNLDQPLLQDHRDVVTLD
NLPDSPPALVPAPSKRARPSPGCLLPEHEDPEERLNRHDQHITAVLTKIIERDTSSVTVN
LPVPSGVAFPPVFHRSQERQGRSAISGKRSIFAQEIAAKRASEAKVPPVREVVSSLDPPE
GAVSYEALAPREQGCQLPWGSPGFQGPHLVTGKGLRSQDAEQEAQTIHEENIAKLQAMAP
EEILQEQQRLLAQLDPSLVAFLRSRSHTHEQAGEKATEEQRPGGHSVEVTGEELIVPISA
KEPRQEDDLDPEAPALALPVNPHKEWVHMDTVELEKLHWTQDLPPLRRQRTQERMQARFS
LQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISR
AQAGEFGDRLVGSVFRLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRALLVAPGDEELLD
TTFSWYHGALVFPLMPSQEDKEDDEDEDEEPPAEKAKRKSPEKGNQPPSDLARRDVIKGL
LATNLLPRLRYVLEVTCPAPSVVLDILAVLIRLARHSLESATRVLECPRLIETVVREFLP
TNWSPVGVGPAPSLYKVPCATAMKLLRVLASAGRNIAARLLSGFDLRSRLCRFIAEAPQE
MALLPEEAEMMSTESFRLWAVAASYGQGGDLYRELYPVLMRALQSVPEELSAQPPQPLSV
QRIASLLTLLTRLTLAASSTAPEPSSDCAEASLSATPSSITWTQVSGLQPLVELCLRQTL
KLLPRPEMWHALGPVPTACLLFLDAYYQAWSQQPNLCPEDWLQDMERLSEDLLLPLLRTP
SLGSLWDSLGCCSPLCNPQFCAPAPEAVPSLVSLGSAGGRPSLWLPGSASPFPFLTALLS
LFNTLARIHKGLCDQLATVLATPGLQNYFLQCLAPVAAPFLTPFSAWALRHEYHLQYLAL
ILAQRVATVQPALVINAALHHSMVLALLSRLLPGSEHLAHELLLSCVFRLEFLPERASGG
LEAADFSDRLSLGSSKDSGCGRGVLLAQACQDLPSIRSCYVTHCPLARASLLASQAWYRG
ELWQVQTLLLPVPKEPLLPTDWPFLPLIHLYHQASDTPSGLPPADTISTALRALQWVLVL
ESWRPQALWAVPPAARLARLMCVFLVDGELFRETPIQHLVAALLARLCQPKVLPDLRLDC
PLPGLASFPDLYANFLEHFEAVSYGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRAL
GLPLTQLPVSLECYTEPPEDNLVLLQLYFRTLVTGVLCPRWCPVLYAVAVAHVNSFIFSQ
DPKSSDEVKAARRSLLQKTWLLADEGLRQHLLHYKLPNSALPEGFELYPQLPPLRQQYLQ
RLTSGMLQNGLSEA
NT seq 4185 nt   +upstreamnt  +downstreamnt
atgctgtcgagaccaaagccaggcgagtcagaggtggatttgctgcgcttccagagtcag
tttcttgcagctggtgcagctccagcagtacaactggtgaagaaaggaaataggagaggt
ggtgacactaacctggaccagcctctgctgcaagatcatcgggatgtggtgacactggac
aatctcccagattcacccccagctttggttcctgctccttcaaagagagctagacccagc
cctggctgtctcctaccagaacatgaggaccctgaagagaggctgaacaggcatgatcag
cacatcactgctgtcctgacaaaaattattgaacgagatacaagttcagtgacagtgaat
ctgcctgtgcccagtggtgttgctttccctcctgtgttccatcgctcacaggagagacaa
gggaggtcagcaatatctggcaagagaagcatctttgcccaagaaattgcagcaaagaga
gcatccgaagccaaggttccaccagttagagaagttgtatcttccctggatccaccagag
ggtgctgtgtcctatgaggcactcgcacccagggagcagggctgccagcttccatggggc
agccctggcttccagggaccccatctggtcacagggaaggggctcaggagccaggatgct
gagcaggaagcccagaccatccatgaagagaacatagcaaaactgcaagccatggctcct
gaggagatccttcaggaacagcagcggttgctggctcagctcgatcccagcttggttgcc
ttcttgaggtctcgcagccatacccatgagcaagcaggagagaaggccacagaggagcag
aggccaggaggacactctgttgaggtcaccggagaggagctcattgtgccaatttctgca
aaggagcccagacaggaagatgatctggatccagaagccccagctctggcgctgcctgtg
aacccccacaaagaatgggtgcacatggacaccgtggagctagagaagctccactggacc
caggatctgcctccgctccggaggcagcggacgcaggagaggatgcaggcccgatttagt
cttcagggagagctgctggcccctgatgtggacctgcccacccatctgggcctgcaccac
catggagaagaagcagagagagcaggatactccctacaggagctattccacctgacacgc
agccaggtgtcccagcagagagcactagcgctgcatgtgttggcccaggtcatcagcagg
gcccaggctggtgagtttggggaccggctagtgggcagtgtctttcgcctccttttggat
gctggtttcctcttcctgctgcgcttctccctggatgacagagtggatggggtcattgca
gccgccgtccgggcgcttcgggctctgctggtggctcccggagatgaggagctcctcgac
accaccttctcctggtaccacggagctttggtgttccctctgatgcccagccaggaagac
aaggaggacgatgaggatgaagatgaagagcctccagcagagaaagcaaaaaggaagagc
cctgagaaaggaaaccagcctccatctgatctggctcgacgtgacgtcatcaaggggctt
ctggctaccaatctgctgcctcggctacgctacgtgctagaggtaacctgcccagcacct
tctgtggtccttgacatcctggctgtgctcatccgtctggcccggcattccctggagtca
gccacaagggtcctagagtgtcctcggctaatagagactgtggttcgagagttcctgcct
accaactggtctcctgtgggagtggggcctgcccccagtctatacaaagtgccctgtgcc
actgccatgaaactacttcgtgtcctggcctcggctggtaggaatattgctgcccggctg
ctgagcggctttgacctccggagtcgcctgtgccgctttatagcagaggctccccaggaa
atggccttgctcccagaggaagctgagatgatgagcactgagtccttccgtctgtgggct
gtggctgcctcctacggccagggtggtgacctttacagggagctgtacccagtgctgatg
cgggccctgcagtctgtgccagaggagctcagcgcccagccccctcagcccctgtctgta
cagcggatagcctccttgctcactctcctcacccggctgaccctggcagccagcagcact
gcgcctgagcccagcagtgactgtgctgaggccagtctgtcggccaccccttcctccatc
acttggacacaggtgtctgggctccagcctcttgtggagctctgtctcagacagaccttg
aagttgctgccaagacccgagatgtggcatgccctgggcccagtgcctactgcctgcctg
ctcttcctggatgcatactaccaggcctggagccagcagccaaatctgtgcccagaggat
tggcttcaggatatggagcgcctgtcagaggacctgctgctacccctgctgcgcacaccc
tctctgggcagcctgtgggattctcttgggtgctgctcccctctctgtaacccacaattc
tgtgctccggcccctgaagccgtccccagcctcgtgtcactgggcagcgcaggaggccgc
ccctctctctggctgcctggctcagcctcacccttcccgttcctcacggcccttctctct
cttttcaacaccttggcccggatccacaaggggctatgtgaccagctggccaccgtattg
gctaccccaggactccagaactacttcctccaatgtttggctcctgtggctgccccattc
ctcacacccttctctgcgtgggccttgcgccatgagtaccacttgcagtacctggcactc
atcctggcccagagagtggcaacagttcagccagccctggtcatcaatgctgcccttcat
catagtatggtcttggccctgctgagccgactgctgcctggaagtgagcaccttgcccac
gagctcctgctgagctgtgtattccgactggagttcctcccggaaagagcatcagggggt
ctggaggccgctgacttctctgaccggctgtccttagggagcagcaaggactctgggtgt
gggcgaggggttctgctggctcaggcttgccaggacctccccagcatccgcagctgctac
gtgacccactgcccactggcccgagccagcctgctagcctctcaggcctggtaccgaggg
gagctgtggcaagtccaaaccctgctgctccctgtgcctaaggagccactgctgcctact
gactggcctttcctgccactgatccacctctaccaccaggcctcagacactccctcgggg
ctccctcctgctgacaccataagcacggctctgcgggccctgcagtgggtgctggtcttg
gagagctggcgcccccaggccctctgggctgtacctcctgctgcccgcttggcacggctc
atgtgtgtgttcctggtggacggtgaactcttccgggagaccccaatacaacatctggtg
gcagccctcctggcccggctctgccagcctaaagtcctgccagacctcaggctggattgc
ccccttcccggccttgcatctttccctgacctctatgccaacttcctggagcattttgag
gctgtctcttatggggaccacctctttggagctctggttctccttcccctgcagcgtcgg
ttcagcgtcactttgcgcctcgccctttttggggagcatgtgggagccctgcgagctctg
ggcctgcctttgacccagttgcctgtgtccttggaatgctatacggagcctcctgaagac
aacctggtcctccttcagctctacttccggaccctggttactggtgtgctgtgtccacgt
tggtgccctgtgctgtatgctgtggctgtggcccatgtcaacagcttcatcttctcccag
gacccaaagagctcagatgaggtaaaggctgcccgcaggagcctgctacagaaaacttgg
ctgctggcagatgagggtctccggcagcaccttctccactataaactccctaattctgcc
ctcccagaaggctttgaactatatccccagttgccccctctgcgtcagcagtacctccag
agactgacctcagggatgctccaaaatgggctatcagaggcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system