KEGG   Canis lupus familiaris (dog): 488371
Entry
488371            CDS       T01007                                 
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:5.6.2.6]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04622  RIG-I-like receptor signaling pathway
cfa05161  Hepatitis B
cfa05162  Measles
cfa05164  Influenza A
cfa05168  Herpes simplex virus 1 infection
cfa05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    488371 (IFIH1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05161 Hepatitis B
    488371 (IFIH1)
   05171 Coronavirus disease - COVID-19
    488371 (IFIH1)
   05164 Influenza A
    488371 (IFIH1)
   05162 Measles
    488371 (IFIH1)
   05168 Herpes simplex virus 1 infection
    488371 (IFIH1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cfa04054]
    488371 (IFIH1)
Enzymes [BR:cfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     488371 (IFIH1)
Pattern recognition receptors [BR:cfa04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   488371 (IFIH1)
SSDB
Motif
Pfam: CARD_2 RIG-I_C-RD RIG-I_C ResIII DEAD Helicase_C CARD SWI2_SNF2 SNF2-rel_dom Sigma70_ner Arg_decarbox_C DUF3638
Other DBs
NCBI-GeneID: 488371
NCBI-ProteinID: XP_545493
Ensembl: ENSCAFG00000010498
VGNC: 41876
UniProt: A0A8P0NCH5
Position
36:complement(7812658..7870597)
AA seq 1029 aa
MWSGRPSADQSFRHLLSCFRARVKTYIQVEPVLDYLNFLPEEVKEQIQRKAANAGNLQAA
ELLLSTLEKGAWPPGWTRQVLVALQSAGSVLASRYLNPELADLPSPSAENAHDQCLQLLH
LLQPTLVDRLLVKDVLDKCVEKKLLTDEDRDRISAAENNGNQSGVRELLKRIVQKENWFS
LFLTVLNQTENYALVQELTGTTCFESKEETENLSQEDGPEVKAAALLAMSQPSPEKEGWD
MENNSLESSLLDSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAER
ASPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKV
IVLVNKVPLVEQLFREEFEPFLKKWYHTIGLSGDTQLKISFPEIVKTYDVIISTAQILEN
SLLNSEKGEDDGVQFSDFTLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKEYKPVI
PLPQILGLTASPGVRGAKRQAEAQQHILKICANLDACTIITVKENINQLKGQMKEPCKKF
AIADDTREDPFKDKLLEIMNKIQSFCQMSPMSDFGTQPYEQWTIQMEKKAAREGNRKDRV
CAEHLRKYNEALQINDTIRTIDAYNHLEAFYNDETEKKLAVQEGDSDESGEDGDGDGDGD
EAEDDEKRPLRLDRTDRFLMELFWENKRMLKKLAQNPKHENEKLIKLRNTIMEQFTRTEE
PARGIIFTKTRQSAFALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISK
FRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSN
SGVIEREIVNDFREKMMYKAIDHVQNMNPEEYAHKILELQMQSIMEKKMKIKRSAAKCYK
ENPSLINFLCKNCSVLACSGEDIHVIEKMHHVNMTPVFKELYIVRENKALRKKFIDYQTN
GEIICKMCGQAWGTMMVHKGLDLPCLKIKNFVVIFKNNTSKKQYKKWVELPIAFPDLDYS
EYCLFSDED
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgtggagcggccgcccctccgcggaccagagcttccgccatctcctgtcgtgcttcagg
gcgcgggtgaaaacgtacatccaggtggagccggtcctggactacctgaacttcctgccc
gaggaggtgaaggagcagattcagaggaaggcggccaacgccgggaacctgcaggcggcc
gagctgctgctgagcaccctggagaagggagcctggccccccggctggacccgccaggtc
ctggtggcccttcagagcgcgggcagcgtcctggcctcgcgctacctgaaccccgagctc
gccgacctgccctcgccgtccgccgagaacgcccacgaccagtgcctgcagctgctgcac
ctcctgcagcccacgctggtggacaggcttctggtcaaagacgtcttggacaagtgcgtg
gagaagaagctgctgaccgatgaggacagagaccggatctctgctgctgaaaacaatgga
aatcaatcaggtgtaagagagcttctgaaaaggatcgtgcagaaagaaaactggttttct
ttatttctgactgttctgaatcaaacggagaactatgcccttgtccaagagctaacaggc
acaacttgctttgaaagcaaagaagagactgagaatttatcacaagaagatggccctgaa
gttaaagcggcagctcttttagctatgagtcagccaagtccagagaaagagggctgggac
atggaaaataattcactggaatcatctttgctggattcttctgtagtttcagaatcagac
acaagtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaac
atgggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagaaaga
gcatcccctgagccagaactgcatctcaggccttaccaaatggaagtcgcccaaccagcc
ttggaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggct
gtttacattgccaaggatcacttggacaagaagaaaaaagcatctgaacctggaaaagtc
atagtccttgtcaataaggtaccactagttgaacagcttttccgtgaagagtttgaacca
tttttgaagaaatggtatcatactattggattaagtggtgatacccaattgaaaatatca
tttccagaaattgtcaaaacctatgatgttatcatcagtacagctcaaatccttgaaaac
tcccttttaaactcagaaaaaggagaagatgatggtgtccaattttcagactttaccctc
atcatcattgacgaatgtcatcacaccaacaaagaagcagtctataataacatcatgaga
cgttacttgaaacagaagttgaaaaataataaactcaagaaagaatacaagccagtgatt
cctctacctcagatactaggactaacagcttcaccaggtgttcgaggagccaaaaggcaa
gctgaagcccagcaacacattttaaaaatatgtgccaatctcgatgcatgtaccattata
actgtgaaagaaaatatcaatcaactcaaaggccaaatgaaagagccatgtaaaaagttt
gcaatcgcagatgacaccagagaagatccatttaaagataaacttttagaaataatgaac
aagattcaaagtttttgccaaatgagtccaatgtcagattttggaactcaaccctatgaa
caatggaccattcaaatggaaaaaaaagctgcacgagaaggaaatcgaaaagaccgtgtt
tgtgcagagcatttgaggaagtacaatgaggccctacaaattaatgatacaattcgaacg
attgatgcatataatcaccttgaagctttctataatgatgagacagagaagaagcttgca
gtccaagaaggtgatagtgatgagagtggtgaggatggtgacggtgacggtgatggtgat
gaagctgaggatgatgaaaagagacctttgagactggataggacagatagatttctcatg
gagttattttgggaaaacaagagaatgttgaaaaagctggctcaaaacccaaaacatgaa
aatgaaaagctgatcaaattaagaaacaccataatggaacaatttacaaggactgaggaa
ccggcccgaggaataattttcacaaaaacacgacagagtgcatttgccctttcccagtgg
attactgaaaataaaaaatttgcagaggtaggagtcaaagcccatcatctaattggagct
ggacacagcagcgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaa
ttccgcacaggaaaaataaatctgcttatcgctaccacagtggcagaagaaggtctggat
attaaagaatgtaatatcgtcatccgttatggtctcgtcactaatgaaatagctatggtc
caggcccgtggtcgagccagagctgatgagagcacctacgtcctggttgcccacagtaac
tcaggggttattgaacgtgagatagttaatgatttccgagagaaaatgatgtataaagct
atagaccatgttcaaaatatgaatccagaggagtatgctcataagattttggaactacag
atgcaaagtatcatggaaaagaaaatgaaaatcaagagaagtgctgcaaagtgttacaag
gaaaacccgtcattaataaatttcctttgcaaaaactgcagtgtgctagcctgctctggg
gaagatatccacgttattgagaagatgcaccatgtcaacatgacaccggtattcaaggaa
ctctacattgtgagagaaaacaaagcactacgaaagaagtttatagactatcaaacaaat
ggcgagatcatctgcaaaatgtgtggccaagcctggggaacgatgatggtgcacaagggc
ttagatttgccttgtctcaaaataaagaattttgtagtgattttcaaaaataatacatca
aagaaacaatacaaaaagtgggtagaattacctatcgcttttcccgatcttgactactca
gaatactgtttgtttagtgatgaggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (12)   
   Pfam (12)   
All databases (52)   

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