KEGG   Canis lupus familiaris (dog): 489747
Entry
489747            CDS       T01007                                 
Symbol
DDX28
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
  KO
K20096  ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfa03009]
    489747 (DDX28)
Enzymes [BR:cfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     489747 (DDX28)
Ribosome biogenesis [BR:cfa03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   489747 (DDX28)
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 ResIII AAA_25
Other DBs
NCBI-GeneID: 489747
NCBI-ProteinID: XP_546867
VGNC: 39853
UniProt: A0A8C0SE54
Position
5:81479630..81481674
AA seq 527 aa
MAVARPPRLLRLAARWLCAPRRDLAGRGPEEPLPVVRIPRALQQRQSGRRSSPRLVLARP
GPLLISARRRELSQPARLTLGRWERAPLASRGWKNRRSRRDHFSIERAQHEVPALRNLSS
EGSFADLGLEPPVLRALKDAAPEVLRPTTVQSSTIPPLLRGRHILCAAETGSGKTLGYLL
PLLQRLLGRPGLNPHSTPAPRGLVLVPSRELAEQVRAVAQPLGISLGLRVRELGGGHGMN
RIRVQLSKQPPADVLVATPGALWKALKSHLVSLKQLSFLVLDEADTLLDESFLELVDYIL
QKSHIAEDPDDLKDPFNPKAQLVLVGATFPEGVSQLLSKVASPDSLTTITSSKLHCIMPH
VRQTFMRLKGAEKVTELVQILKQHDRAYRTGPSGTILVFCNSSSTVNWLGYILDDHKIQH
LRLQGQMPASMRAGIFQCFQKGSRDILLCTDIASRGLDSTHVELVVNYDFPLTLQDYIHR
AGRVGRVGSEVPGTVISFVTHPWDVSLVQKIELAARRRRSLPGLGPQ
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggctgtggcgcggccgccgcggctgctgcggctcgcggcccggtggctttgcgcgcct
cgacgggacctggcgggccgcggtcctgaggagcccctgcccgtggttcgcatcccgcgg
gctctacaacagcggcagagcgggcgacggagttccccgcggctggtgctggcgcggcct
ggcccgctgctcatctcggcgcggcggcgggagctgagccagccggcgcgcctcacgctg
ggccgctgggagcgcgcgccactagcttcgcgtggttggaagaatcggcgctcccgcaga
gaccacttctccatcgagcgcgcgcaacacgaggtaccagcgctgcggaacctctcatcc
gagggcagcttcgcggatctgggtctggaacccccagtgcttcgtgcgctgaaggatgct
gcgcctgaagtccttcggcctacaaccgtgcagtccagcaccattccccctctacttcgc
ggccgccacatcctttgcgccgcggaaacgggcagtggcaagactctcggatacctacta
cccctgcttcagcggctcctgggccggccaggcctgaatccccacagtacacctgctcct
cgaggcctcgtccttgtgccttcgcgagaattagcggaacaggtgcgggcagtggcccag
cccttgggcatctctttgggcctccgggtgcgagagctagggggaggccatggcatgaat
aggatccgggtgcaactgtccaaacaacctccagcagacgtactagtggccactccagga
gctctgtggaaggccctgaaaagtcacctagtcagcctgaagcagctctccttcttggtg
ttggatgaggcagacacactattggatgaaagcttcttggaactagtggactacatcttg
cagaagagccatatagcagaagacccagatgacttaaaagaccccttcaatcccaaagct
cagttagtgctggtgggggccacatttcccgaaggtgtaagccagctgctaagtaaagtt
gccagcccagactctctgaccaccatcaccagctctaagctccactgcatcatgcctcat
gttagacagacatttatgaggctgaagggagcagagaaggtgactgaattggtgcagatc
ctcaagcagcatgacagagcatataggactggtccctcgggaactattctggtgttctgt
aatagctccagcactgtgaactggctgggatatattctggatgaccacaaaatccaacac
ctaaggctgcagggacaaatgccagcctcaatgagagcaggtatcttccagtgcttccag
aagggctcccgggacatactcctctgcacagacatagcctctcggggcctggacagcacc
catgtagagttagttgtcaattacgatttccccctcaccctgcaagactacatccataga
gccggtagggtgggccgtgtagggagtgaggtgcctggcactgtcatcagctttgtgacc
catccctgggatgtaagcctggttcagaagattgagctggcagctcgtcggaggagaagt
cttccaggactaggtcctcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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