KEGG   Canis lupus familiaris (dog): 489966
Entry
489966            CDS       T01007                                 
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X10
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    489966 (TNRC6A)
   03036 Chromosome and associated proteins [BR:cfa03036]
    489966 (TNRC6A)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     489966 (TNRC6A)
Chromosome and associated proteins [BR:cfa03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    489966 (TNRC6A)
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook
Other DBs
NCBI-GeneID: 489966
NCBI-ProteinID: XP_038400150
Ensembl: ENSCAFG00000017531
VGNC: 47699
Position
6:complement(22816233..22917782)
AA seq 1776 aa
MEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKR
ATANNPQQQQQPQPPQQPQQPPQQPPQPPQQQPQPAQALPRYPREVPPRFRHQEHKQLLK
RGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQNSKNQSDINHSTSGSHYENS
QRGPVSSPSDSSTNCKNAVVNDSPETEAWPSVPGSDPELASECMDADSASSSESERNITI
MASGSTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHGSSPGPWGFSHGAIISTCQVSVDA
PESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLDNNGLALKGPVGSGSSG
INIQCSTIGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEM
TGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGE
PKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQPGINGPMGTNFQVNTNKGG
GVWESGATNSQNASWGSGNGANSGGSRRGWGTPAQNTGTNIPSVEWSKLPSNQHSNDSAN
GNGKKFTNGWKSTEEEDQASAASQTTEQNSVWAKTGGTVESEGSTESTGRLEEKATGENQ
SRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTE
AWGSSATQTFNSGACTDKTSPTSNDTSSVSGWGDPKPALRWGDSKGSSCQGGWEDDAAAT
GMVKSNQWGNSKEEKSAWNDSQKSKQGWGDGQKSNQGWSVSASDNWGETSRSNHWGEANK
KSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPNPSQGWGDPPKSNQS
LGWGDSSKPVTSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPTKEEEPTGWEEPS
PESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQVHQLLPSASAISN
KEAGSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASNTSTWGSSSVGP
QALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTK
KMSSKGLSGKKRRRERGTMKGGNKQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSG
GMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERSPYFDKDGIVADESQNMQ
FMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPP
AQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLS
QISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTP
PSQQQPLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEP
QSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIG
DGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDH
LRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNT
SLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDARYTPGKTN
MLPGMVSYGLFAEQEPVPTVESNRDLCITHCEIGFE
NT seq 5328 nt   +upstreamnt  +downstreamnt
atggaagaaaagaaaaagaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaag
gccactgaacaaaaaatcaaagtgccagaacagataaagcccagtgtaagccagcctcag
cctgccaactctaataacggcacttccacagcaaccagcactaataataatgccaagcga
gccacagccaacaatccgcagcagcagcagcagccacagccgccacagcagccacagcag
ccgccgcagcagccaccgcagccgccacagcagcagccgcagccagcacaggccttgcct
cggtatcctcgggaagtaccaccacgatttcgccaccaggaacacaaacagcttctaaag
aggggtcagcattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagc
agccagtcagaaagcagtgctttaacaaatcaacagccacaaaataacggagaggtgcag
aacagcaaaaaccagtcagatataaaccacagtacttcaggatcccattatgaaaattca
cagcggggacctgtgtcttctccgagtgactctagcacaaattgtaagaatgctgttgta
aacgactcccctgagacagaagcatggccctcagtccctggcagtgatccagagttggct
tcagaatgtatggatgctgattctgcctccagttctgaatcagagagaaacatcactatc
atggcttcagggagcacaggtggtgaaaaagatggccttcggaatagcactggacttggt
tcccaaaacaagtttgtggttggtagcagcagcaataatgtgggccatggaagtagtcct
gggccatggggtttttcccatggagccataataagcacatgtcaggtctctgtggatgct
cctgaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcactgtaagttct
tcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctgg
ccagtattagacaacaacggacttgccctcaaagggcctgtagggagcggtagttctggc
atcaatattcagtgtagtaccataggccagatgcctaacaatcagagtattaactctaaa
gtgggtggttcttccacccatggtacctggggaagccttcaggaaacttgtgaatctgaa
gtaagtggtacacagaaggtttcattcagtggtcaacctcagaatattaccactgagatg
actggaccaaataacactactaactttatgacctctagtttaccaaactccggttcagta
cagaataacgaactgcctagtaatacaggggcctggcgtgtgagcacaatgaatcatcct
cagatacaggctccatcggttatgaatggcacttccctttctcatcttagcaatggagag
ccaaaaagtggaggctcttacggtactacgtggggtgcctatggttctaattactctgga
gacaaatgttcgagccctaacggccaagctaatggtgacactgtgaatgcaactctaatg
cagcctggcataaatgggcctatgggcactaactttcaagtgaacacaaataaaggagga
ggtgtgtgggagtctggggcaacgaattcccagaatgcatcgtggggaagtggaaatggc
gcaaattctggaggaagtcgacgaggatggggaactcctgcacaaaacactggcactaat
atacccagcgtggagtggagcaaactgcctagcaatcagcattccaatgacagtgcaaat
ggcaatggtaagaagtttacaaatggatggaaatctactgaggaagaggatcaggcttct
gccgcatctcagacaactgagcagaacagtgtgtgggccaaaacaggaggtacagtggag
agtgaaggtagtacagaaagcactggacgcctcgaggagaaagccactggggaaaatcag
agtagagatcggagaaaaattgatcagcacacattactccaaagcatcgtaaacagaact
gacttggatccacgtgtcctctccaactctggttggggacagactcctattaagcagaat
actgcctgggatacggaaacatcacctagaggggaaagaaagactgacaatgggacagag
gcctggggaagctctgcaacacagacttttaactcaggggcatgtacagataagactagc
cctactagtaatgatacctcatctgtatcggggtggggagatcccaaacctgctctgagg
tggggagattccaaaggctcaagctgccaggggggatgggaagatgatgctgctgctaca
ggaatggtcaagagcaatcagtgggggaacagcaaagaagagaagtccgcatggaatgat
tcgcaaaagagcaaacagggatggggtgatggacagaaatcaaaccaagggtggtccgtt
tctgccagtgataactggggagaaacgtcaaggagtaaccattggggtgaggctaataag
aaatctagctcaggaggtagtgacagtgacaggtctgtttctggttggaatgaacttggt
aaaactagttcttttacttggggaaataacataaatccaaataattcgtcaggatgggat
gaatcttctaaacctaatccttcccagggatggggagatcctccaaagtctaatcagtct
ctaggttggggagattcgtcaaagccagtcacttctccagactggaacaagcaacaagac
attgtcgggtcttggggaatcccaccagcaacaggcaaacctcctggtacaggctggctg
ggaggacctataccagccccaacaaaagaagaagagcccacaggctgggaggaaccatcc
ccagaatccatacgtcgcaaaatggagatcgatgacggaacttcagcttggggagatccg
agcaaatacaactacaaaaatgtgaacatgtggaacaaaaatgtcccaaatggcagcagc
cgttcagaccagcaagcacaggtacaccagttgctaccatctgcaagtgccatctcaaac
aaagaggcaggcagtggctctggctggggtgagccctggggggagccttctactccagcc
acaactgtggataatggtacttcagcatggggtaaacccatagacagtggtcccagctgg
ggggagcccattgctgcagcatccaacacatccacgtggggctccagctctgttggtcct
caagcattaagcaaatctgggccaaaatctatgcaagatggctggtgtggtgatgatatg
ccattgcctggaaatcgccccactggctgggaagaggaagaggatgtagagattggaatg
tggaatagtaattcatctcaagagcttaactcatctttaaattggcctccatatacaaag
aaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaaccatgaaa
ggtggaaacaaacaagaagaagcatggataaatccattcgttaaacagttttcaaatatc
agtttttcgagagactcacccgaagaaaatgtacagagcaataagatggatctttccgga
ggaatgttacaggacaaacgaatggagatagataaacatagcctaaatattggtgattac
aatcgaacggtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatg
gagcgcagcccttactttgataaggatggcattgtagcagatgaatcccaaaacatgcag
tttatgtccagtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggcc
cttggctccatagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaat
cccagtatgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctcca
gcacaacctcttagttcatctcagcctaatcttcgtgctcaagtgcctcctccattactc
tcccctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccg
ctctttggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttct
cagatctcccagttacagagattgttagcgcagcagcaaagggcgcagagtcagagaagc
gtgccttctgggaaccggcagcagcaagaccagcagggtcgacctcttagcgtgcagcag
cagatgatgcagcagtcccggcaactcgatcccagcctgttggtgaagcagcagaccccg
ccatctcagcagcagccactccatcagccagccatgaaatccttcctcgagaatgtcatg
ccccacactacacctgagctgcagaaagggccatcaccaataaatgctttcagcaacttc
ccgataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagcca
cagtcaagactaaggaagtggactacagtggacagcatttctgtgaacacatctttggat
caaaactccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctccattt
gttccctatgactttatgaacagcagtacttctccagccagccctccgggttcaatagga
gatggctggccacgtgccaaatcgcctaacggctctagcagtgttaactggccaccagaa
tttcgccctggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttac
gtcactcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccac
ctcagggacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagt
gcctggtcatccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagc
acttcagccagaaatagtgattccaaattgacatggtctcctggttcagttacaaacacc
tctctggctcatgagctgtggaaggtccctttaccacctaaaaacatcactgctccgtcc
cgcccacctccgggactcactggtcagaagccacccttgtctacgtgggataactctccc
cttcgtgtaggtggaggatggggaaattctgacgccaggtacaccccaggtaagacaaac
atgcttcctgggatggtttcttatggtttatttgctgaacaggaaccagtacccacagtt
gaatctaacagagacctgtgcattacccactgtgaaataggatttgaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (35)   
   RefSeq(pep) (35)   
DNA sequence (43)   
   RefSeq(nuc) (43)   
Protein domain (2)   
   Pfam (2)   
All databases (121)   

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