KEGG   Canis lupus familiaris (dog): 607803
Entry
607803            CDS       T01007                                 
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    607803 (DHX58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cfa04054]
    607803 (DHX58)
Enzymes [BR:cfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     607803 (DHX58)
Pattern recognition receptors [BR:cfa04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   607803 (DHX58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII Helicase_C DEAD SWI2_SNF2 AAA_19 AAA_22 Terminase_6N
Other DBs
NCBI-GeneID: 607803
NCBI-ProteinID: XP_013972040
Ensembl: ENSCAFG00000015720
VGNC: 39951
UniProt: A0A8C0LX22 A0A8I3NFT8
Position
9:20248380..20256796
AA seq 678 aa
MELRPYQWEVIMPALEGKNIIVWLPTGAGKTRAAAYVAKRHLETVDQAKVVVLVNRVHLV
TQHCEEFSRMLGKRWAIITLSGDMGPRAGFGHLARSHDLIICTAELLQMALTSPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNLILSRYLEHKLQRTRPLPQVLGLTASPGTGGASTLDG
AIDHILQLCANLDTWHIMSPENHRPQLQEHSAQPCKQYSLCHRRSQDPFGDMLKKLMDRI
HNRLEMPALNRDFGTQTYEQQVVELSQDAAQAGLQQRRVYALHLRRYNDALLIHDTVRAV
DALKSLGDFYDRERATKTQVLQAERWLLALFDDYKNELAHLATQTPENPKLEMLEQILRE
QFGHSDSPRGIIFTQTRQSTHSLLLWLQQQPGLQTVDIRADLLIGAGNSSQNTHMTQRDQ
QEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLSNEISMVQARGRARAGRSIYS
FVATQGSRELRRELINEVLETLMERAVAAVQKMDQAEYQAKIRDLQQAALVKRAVQAAQR
DNQRQQFLAEQVQLLCVNCMVAVGHGSDLRKVEGAHHVNVNPNFSIYYNVSRGPVVIDRT
FKDWRPGGTIHCRNCGEAWGLQMIYKSVKLPALKVRSMLLETPRGRVQAKKWSRVPFPVP
DFDYLQHCAQNLADLSLD
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcgtgtggctgcccactggagctgggaaaacccgggctgctgcttatgtggccaagagg
catctagagactgtggaccaagccaaggtggttgtactggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccgcatgctgggcaaacgctgggccattataaccctg
agtggggacatggggccacgagctggctttggccacctggccaggagccatgacctgatc
atctgcacagctgagctgctacagatggcgctgaccagcccggaggaggaggagcacgtg
gagctcaatgccttctccctgctcgtggtggatgagtgtcaccacacgcacaaagacact
gtctacaacctcatcctgagccggtacctagagcataaactccagaggacacggccgctg
ccccaggtgctgggtctcacagcctccccgggcactggcggggcctccacgctcgatgga
gcaattgaccacatcctacagctctgtgccaacctggacacgtggcacatcatgtcaccg
gagaaccatcgcccccagctgcaggaacacagtgctcagccatgcaaacagtacagtctc
tgccataggcgcagccaggacccatttggggacatgctgaagaagctcatggaccgaatc
cacaaccgcctggagatgcccgcgttaaaccgcgactttgggacacagacttatgagcag
caggtggtggagctgagccaggatgcggcccaggccggactccagcagcgccgggtatac
gctcttcacctgcggcgctacaatgatgcgctgctcatccacgacacggtccgcgctgtg
gacgccctgaagtcgctgggagatttctacgacagggagcgcgccacgaagacccaggtc
ctgcaggctgagcgctggctgctggcactgttcgatgattacaagaatgagctggcccac
ctggcaacacagaccccagagaacccaaaactggagatgctagaacagatcctgcgggag
cagtttgggcattccgacagccccaggggcatcatcttcacccagacccgccagagcact
cactccctcctactctggctccagcagcagccaggcctgcagacagtggacattagggct
gacctgctgattggggctggaaatagtagccaaaacacccatatgacccagagagaccag
caagaagtgatccgaaagttccgggttggcactctgaacctcctggtggccacaagtgtg
gcagaagaggggctggacatcccccagtgcaatgtggtggtacgttacgggctcctgtcc
aacgagatctccatggtccaggcaaggggccgggcccgggctggtcggagcatatactca
tttgtggcaacccaaggcagtcgggagctacgacgggagctgataaacgaggtgctggag
actttgatggagcgggccgtggctgctgtgcagaagatggaccaggctgagtaccaggcc
aagatccgagatctgcagcaggcagccctggtcaagagggcagtccaggcagcccagcgg
gacaaccagcggcagcagttcctggccgagcaggtgcagctcctctgtgtcaactgcatg
gtggctgtgggccacgggagtgacctgcggaaggtggagggcgctcaccacgtcaatgtg
aaccccaacttctcgatctactacaatgtctcccgggggccggtggtcattgacagaacc
ttcaaggactggaggcctgggggtaccattcactgcaggaactgtggggaggcctggggc
ctgcagatgatctacaagtcagtgaagctgccggcactcaaagtccgcagcatgcttcta
gagacaccccgagggagagtccaggccaagaagtggtcccgtgtgcccttccccgtgcct
gacttcgactacctgcagcactgtgcccagaacctggcggacctctccctggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (17)   
   UniProt (2)   
   RefSeq(pep) (15)   
DNA sequence (23)   
   RefSeq(nuc) (23)   
Protein domain (9)   
   Pfam (9)   
All databases (66)   

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