KEGG   Canis lupus familiaris (dog): 609521
Entry
609521            CDS       T01007                                 
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04015  Rap1 signaling pathway
cfa04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    609521 (RAPGEF6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    609521 (RAPGEF6)
SSDB
Motif
Pfam: RasGEF RA PDZ RasGEF_N cNMP_binding PDZ_6 PDZ_2 Tcp10_C
Other DBs
NCBI-GeneID: 609521
NCBI-ProteinID: XP_003431670
Ensembl: ENSCAFG00000024183
UniProt: A0A8C0SGK1
Position
11:complement(18572675..18769686)
AA seq 1614 aa
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETVARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHITDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEITHPDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPSSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEHTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVDTDEEKFQMMSL
QWEPAYGTLTKNLSEKRSAKSSEMSPVPMRSAGQTAKAHLHQPHRVSQVLQVPAVNLHPI
RKKGQAKDPATLSTNLPQKVLGTTEEVSGKKHPEDTISVASSLHSSPPASPQGSPRKGYT
LTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERCSSQAVAVPESTGPLEKTE
HSSGIGDHSQLGPGWTLSKPSLVKSLAGSFSVSNEEISHEHVILEAADSGRGSWTSCSSS
SHDNFQSLPNPKGWDFLNSYRHTHLDGPIAEVEPPDCEPYSCPKGCSRTCGQCKGNLETN
QMRQSWASSSSLSDTYEPNYGTVKRRVLESITPESCESLDPKDGTDPVYKTVTSSTEKGL
IVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPDYSVAVQRSKMMHDSLS
RLPPTSLGSSPVACVPSRIVTQPQRHILQPSHPKLADVTDADSEADENEQVSAV
NT seq 4845 nt   +upstreamnt  +downstreamnt
atgaactcacccgtggaccccggcgctaggcaggcgctgaagaagaagcctcccgagcgg
acccccgaggatttaaatactatttattcttatcttcatgggatggaaatactatcaaat
ctcagggagcatcagcttagattaatgtctgcaagagcacgctatgagagatacagtggt
aatcaaattcttttttgttcagaaactgttgccagatgttggtatattctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccatgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcggcga
aggtttcggaaaattaattataaaggagaacgccagactattactgatgatgtggacatt
aacagctatctttctcttccagccgatcttaccaagatgcacatcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagcatcgccagtgactctggg
agcagcagtttatctgatatctatcaggctacggaaagtgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagaaatt
gatcgaacggatccactacaggggcgagatcttgttcgagaatgtcttgagaaagaacct
gcagacaaaactgatgatgacattgaacaattactggagtttatgcaccagctcccagct
tttgcaaacatgaccatgtctgtaagaagagaactctgctcagtgatgatttttgaagtg
gtggagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaatcactcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggacaaacagtacatgcatggagttgttagg
acgaaagtagatgattgtcagtttgtctgcatagcgcagcaggattattggagaatttta
aatcatgtggagaaaaacacccataaagttgaggaagagggagaaattgtcatggtacat
gagcatcgtgaactagatcggagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttaatagaagagcattccattgtggacccgacttatata
gaagatttcctgctaacttacaggacatttcttgaaagtcctttggatgttgggatcaaa
ctattggaatggtttaaaattgacagcttaagggataaggtaacaaggattgtgttatta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacgaaaatgaatggtcatctccggttattgaatatt
gcctgtgctgcaaaggccaagtggagacaggtggtgctgcaaaaggcttcccgggagtcc
cctctgcatttcagccttaatggagggagtgagaagggctttggtatttttgttgaagga
gtagaacctagtagcaaagctgctgatgctggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgaaaatattacatttgtgaaagcccttgaaattttaaggaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagaattacttagt
aggactgaacaagaaaaatctggtgttcctcatattcctaaaattgctgaaaaaaaaagt
aatcgccattcaatccaggatgtaccgggagatattgaacacacatcacaggagaaagga
aataagaaaataaaagcaaacactgtttcaggtggaagaaacaaaattaggaaaattttg
gataaaacacggtttagtatcttacctccaaaactgtttagtgatggaggcctgagccag
tcacaagatgacagcattgtgggaacaagacactgcaggcacagtctggctatcatgcct
attcctggaacactctcatccagcagccctgatctcttgcagcctaccaccagcatgttg
gatttttctaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatcagtaaagacactacagctaaagaagttgtctgtcatgct
gttcatgaatttggtttgactggtgcatccgacacgtattctctctgtgaagtttctgtt
actcctgagggtgtcataaaacaaagaagacttccagaccaattctccaaattagctgat
agaattcagctcaatggaagatattatttaaaaaataacatggaaacagaaaccctatgt
tcagatgaagatgctcaagaactagttaaggaaagccaactatccatgctgcagctcagt
accattgaggtggccactcagctgtcaatgagggactttgatttgtttcgtaatattgag
cctactgaatacattgatgacctttttaagttagattccaaaacaggaaatactcacttg
aaagagtttgaggacattgttaaccaggagacattctgggttgcctcagagattttaacg
gaatcaaatcagttgaaacgaatgaagattattaagcattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggcttgaacctggca
tctgtagcacgactcagaggtacttgggaaaaattaccaagcaagtatgagaaacacctt
caagatctacaggacctttttgatccatctagaaacatggcaaaatatagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acatttctacatgaaggaaatgactccaaagtagatggtttagtgaattttgagaagcta
agaatgattgccaaggagatccgtcaggttgttcgaatgacttctgctaacatggaccca
gctatgatgtttcgacagaggaagaagaggtggcggagtctggggtcactgagtcaaggc
agcacaaactcaaacatgctggatgttcaaggaggtgcacacaagaaaagggcacgtcgc
agctctctacttaatgccaagaagttatacgaggatgcccagatggcaaggaaagtgaag
cagtatctttccagtctggatgtcgacacagatgaggaaaagtttcagatgatgtctttg
cagtgggagcctgcctatggtaccttgaccaagaatttaagtgagaaaagatcagccaaa
tcatcagaaatgtctccagtgcctatgagatcggcaggccaaacagctaaagcacatttg
catcagccccaccgagtaagccaggtgcttcaagtgccagctgttaatttgcaccccatc
aggaagaagggacaagccaaagaccctgccacgttgagtacaaatttacctcagaaagtt
ttaggaacaactgaagaagtaagtggtaagaaacatccagaagacactatctctgtggca
tcatccttacattctagccctcctgcatctcctcaaggttcccctcgcaaaggttataca
cttacaccatcagctaaatctgacaacttgtctgactccagccatagtgaaatttcttca
cgatccagcattgtgagcaattgttctgttgactccatgtctacagctctacaggatgaa
cggtgttcttcacaggctgtggcggtccctgaatccactgggcctttggaaaagacagaa
cactcctcagggataggagaccatagtcagcttggccccgggtggacgctgtcaaagcca
tctctagtcaagagcttagctggctcattttctgtgagtaatgaggagatttctcatgag
catgttattttagaagcagcggatagcggtcgtggaagttggacttcttgttcaagcagc
tcccatgacaacttccaaagccttccaaacccaaaaggctgggattttttgaactcttat
cgacatactcatttggatggccccattgctgaagtggaaccccccgactgtgagccctat
tcttgccctaaaggctgctctagaacttgtggtcagtgtaaaggaaacctggagactaat
cagatgagacagagttgggcatcctctagttctctgtctgacacatacgaaccaaactat
gggacagttaaacggagagtgttagagagcatcacacctgagtcctgtgaaagcttggat
cccaaggatggcactgacccagtttacaaaactgttacttcaagtacagaaaagggcttg
attgtgtactgtgtcacttcacccaagaaggaggataggtatagggagccacctcccact
cctccaggatacatggggatttctttagcggacctaaaggaaggaccccacctacaccta
aaacctccagattatagcgtggcagtgcagaggtcaaagatgatgcatgacagcctctct
agactgccacccacttctctcggtagcagccccgtggcctgtgttccatcgaggattgta
actcagcctcagaggcatattttgcagccatcccatcctaaactagcagatgtgactgac
gcagatagcgaagcagatgaaaatgaacaggtctcagcagtgtag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (47)   
   UniProt (1)   
   RefSeq(pep) (46)   
DNA sequence (46)   
   RefSeq(nuc) (46)   
Protein domain (8)   
   Pfam (8)   
All databases (123)   

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