KEGG   Canis lupus familiaris (dog): 612172
Entry
612172            CDS       T01007                                 
Symbol
LINGO3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    612172 (LINGO3)
Membrane trafficking [BR:cfa04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    612172 (LINGO3)
SSDB
Motif
Pfam: LRR_8 I-set LRR_4 Ig_3 LRR_1 ig LRR_5 Ig_2 V-set LRRNT LRR_9 LRR_6 Sp38
Other DBs
NCBI-GeneID: 612172
NCBI-ProteinID: XP_854999
VGNC: 42690
UniProt: A0A8C0SAZ9
Position
20:56551520..56555841
AA seq 592 aa
MTCWLCVLSLQLLLLPAAPPPAGGCPARCECTAQTRAVACPRRRLTAVPDGIPAETRLLE
LSRNRIRCLNPGDLAALPLLEELDLSENVIAHVEPGAFANLPRLRVLRLRGNLLKLIPPG
VFTRLDNLTLLDLSENKLVILLDYTFQDLRSLRRLEVGDNHLVFISRRAFAGLLALEELT
LERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFRRLPGLLHLEIDNWPLLEEVAA
GSLQGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH
LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEENTFHSVNTLETLRVDGNPLACDCRL
LWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQRVTAA
AGDDVRFQCRAEGEPAPTVAWVTPRHRAVTASSAGRTRVLPGGTLEIQGARPQDSGTYTC
VASNAGGNDTYFATLTVRPEPAANRTPSEGRNETQAAVRFPLDLTTILVSTAMGCITFLG
VVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAATGQGGARKFTMKMI
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgacctgctggctgtgcgtcctgagcctgcagctcctgctcctgcccgcggccccgccc
cccgccggcggctgcccggcccgctgcgagtgcacggcgcagacacgcgcggtggcctgt
ccccggcgccggctgaccgccgtgcccgacggcatcccggccgagacgcgcctgctggag
ctcagccgcaaccgcatccgctgcctgaaccccggcgacctggccgccctgccgctgctg
gaggagctggacctgagcgagaacgtgatcgcgcacgtggagccgggcgccttcgccaac
ctgccgcgcctgcgcgtcctgcggctgcgcgggaacctgctcaagctcatcccgcccggg
gtcttcacacgcctggacaacctcacgctgctggacctgagcgagaacaagctggtcatc
ctgctggactacaccttccaggacctgcgcagcctccgccggctggaggtgggcgacaac
cacctggtgttcatctcgcgccgggccttcgcggggctgctggcgctcgaggagctgacc
ctggagcgctgcaacctgacggcgctgtcgggcgagtccctgggccacctgcgcggcctg
ggcgcgctgcggctgcggcacctggccatcgccgccctggaggaccagaacttccgcagg
ctcccgggcctgctgcacctcgagatcgacaactggccactgctggaggaggtggccgcg
ggcagcctgcagggcctcaacctgacctcgctgtccgtcacacacaccaacatcacggcc
gtgcccgcggccgcgctccgccaccaggcccacctcacctgcctcaacctgtcgcacaac
cccatcagcacggtgccgcgcggctccttccgagacctggtgcgcctgcgcgagctgcac
ctggcgggcgccctgctggcggtggtggagccgcaggccttcctggggctgcggcagatc
cgtctgctcaacctctccaacaacctgctgtccacgctggaggagaacaccttccactcg
gtcaacacgctggagacgctgcgcgtggacgggaacccgctggcctgcgactgccgcctg
ctgtggatcgtgcagcgccgcaagaccctcaacttcgacgggcggctgccggcctgcgcc
accccggccgaggtccgcggcgacgcgctgcgcaacctgcccgactcggtgctcttcgag
tacttcgtgtgccgcaaacccaagatccgcgagcggcggctgcagcgcgtcacggcggcc
gcgggcgacgacgtgcgcttccagtgccgcgccgagggcgagccggcgcccaccgtggcc
tgggtgacgccgcggcaccgcgcggtgaccgcctccagcgcggggcgcacgcgggtgctg
cccgggggcacgctggagatccagggcgcgcgcccgcaggacagcggcacctacacgtgc
gtggccagcaatgcgggcggcaacgacacctacttcgccacgctgaccgtgcggcccgag
ccggccgccaaccggaccccgagcgagggccgcaacgagacgcaggcggccgtgcgcttc
ccgctggacctcaccaccatcctggtgtccaccgccatgggctgcatcaccttcctgggc
gtcgtcctcttctgcttcctgctgctcttcgtgtggagccgcggccgcgggcagcacaag
aacaacttctcggtggagtactccttccgcaaggtggacgggcccgccgccgccaccggc
caggggggcgcccgcaagttcaccatgaagatgatctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (13)   
   Pfam (13)   
All databases (35)   

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