KEGG   Cryptosporidium hominis: Chro.30359
Entry
Chro.30359        CDS       T00210                                 
Name
(RefSeq) replication factor C3
  KO
K10756  replication factor C subunit 3/5
Organism
cho  Cryptosporidium hominis
Pathway
cho03030  DNA replication
cho03410  Base excision repair
cho03420  Nucleotide excision repair
cho03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Chro.30359
   03410 Base excision repair
    Chro.30359
   03420 Nucleotide excision repair
    Chro.30359
   03430 Mismatch repair
    Chro.30359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cho03032]
    Chro.30359
   03036 Chromosome and associated proteins [BR:cho03036]
    Chro.30359
   03400 DNA repair and recombination proteins [BR:cho03400]
    Chro.30359
DNA replication proteins [BR:cho03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Chro.30359
  DNA Replication Termination Factors
   ELG1-RFC complex
    Chro.30359
Chromosome and associated proteins [BR:cho03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Chro.30359
DNA repair and recombination proteins [BR:cho03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Chro.30359
  Check point factors
   HRAD17(Rad24)-RFC complex
    Chro.30359
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 AAA_19 AAA_30 AAA_11 DEAD AAA_22 ResIII PIF1 AAA_5 AAA_16 DUF815 RuvB_N bpMoxR AAA_7 AAA_assoc_2 AAA_3 SLFN-g3_helicase DNA_pol3_delta T2SSE AAA_23 NB-ARC Mg_chelatase DO-GTPase1 Torsin AAA_24 AAA_28
Other DBs
NCBI-GeneID: 3414135
NCBI-ProteinID: XP_667086
Position
3
AA seq 377 aa
MEEAQLPWVEKYRPSGLQDLLSHKDIINTIEKFISSGQLPHLLFHGPPGTGKTSTIHAIS
KCIYKDRKYQMVLELNASDDRGINVVRDAIKSFSESASTTLNHSGGTNSNIEYIEMSDVS
TRNLDCNKSLCENIKLIILDEADMMTSTAQMALRRIMERYSEHVRFCIICNYVNKITPAL
QSRCTRFRFSPLPIEDIRNRISEIALSERIFVTREGQESLIKSSRGDMRKVLNVLQSCSM
SNYGNIQKHKDSGELNGVSIEGLITYINEEMIHRILGIPTKSELDYIFGILSRESFSSGF
SALQNSQNKNGYSTQDFVNGLYSKSMEANWPDEVVPLLMRRLADIEYRLSRGASESIQLA
AIVSCFHEVRMEMEKLV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggaggaagctcaattaccgtgggttgaaaagtataggccttcaggactgcaggactta
ctgtcgcacaaggatataattaacactatcgaaaaatttattagttctggccagcttcca
caccttttattccatggacctcctggaactggaaagacttcaactatacatgcaattagc
aaatgtatttacaaagatagaaagtatcagatggtgttggaactcaacgcatcagacgac
cgtggcataaatgttgtaagggatgcaatcaagagtttttcagaaagcgcatcaacgaca
ttaaatcactcaggcggaacaaattcaaatattgaatatatagaaatgtctgatgtaagc
acaagaaatttagactgtaataaaagcttgtgtgagaatattaaattaattattctagat
gaggcagatatgatgacaagcacagctcaaatggcactaagaagaataatggagcgttat
tccgaacatgttagattttgtatcatttgcaactatgttaataaaataactcctgcattg
caaagcagatgcacacggtttagattttctccacttcctattgaggatattaggaatcga
atatcagaaattgctctgtcagagaggatttttgtaactcgagaaggtcaagagtcgctc
ataaagtcttcaaggggagacatgaggaaagttttaaatgtattgcagtcatgcagcatg
agtaattacggaaacattcaaaaacataaagattccggggaactaaatggggtatctatt
gaaggacttatcacatatattaatgaagaaatgattcacagaattcttgggatacccaca
aagagtgaattagattatatatttggaattctctcaagagagagtttttcaagtggcttt
agtgcgcttcaaaattcccagaataagaacggatattctacccaagatttcgtaaatggt
ctttacagcaagtcaatggaagcaaattggcctgatgaagtcgttccgttacttatgagg
cgccttgcagatatcgagtataggctttcaaggggggctagcgaaagcatacaactggct
gcaattgtttcttgcttccatgaagttagaatggaaatggagaagctcgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (44)   

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