KEGG   Ciona intestinalis (yellow sea squirt): 100178290
Entry
100178290         CDS       T01056                                 
Name
(RefSeq) tRNA wybutosine-synthesizing protein 5-like
  KO
K18066  tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100178290
Enzymes [BR:cin01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.42  tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase
     100178290
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    100178290
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC
Other DBs
NCBI-GeneID: 100178290
NCBI-ProteinID: XP_002125620
Position
7:complement(1626289..1627311)
AA seq 314 aa
MQKSVQVNVAYNVDESNFVEKVQSKRRPCVLKGLDIGECSTKWTAEYLSNVGGKVECVIH
VSETPQMDFINKNYLYRKLPFSEVVKRAAERNHTEYFLTKNEYYYFRSLGENVRKDASNI
TEQFQQIKDDIRIPEFFPPQSFFSSVFRIASAGMQLWTHYDVMDNLLIQVNGRKRVVLFA
PSDALHLYLQGDKSLVTDIDNPDIKKFPKFVQAVRFECVLEAGDVLFIPALWFHNVVALE
FGVAVNVFWKNLQSEMYDKKDPYGNKDLIPAARSMDILNRALKVLDELPEDYKDFYARRM
VARIQEKSFKTEKL
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcaaaaatcggtacaagttaatgttgcatacaatgtggacgagtctaattttgttgaa
aaagtccaaagtaaaagaagaccatgtgtgttaaaaggattagatattggagaatgttca
accaagtggacagctgagtatttatccaatgttgggggtaaagtagagtgtgttatacat
gtgagtgaaacaccccagatggattttatcaataaaaactatctctaccgtaaactacct
ttcagtgaagttgtaaaaagagcagctgaaagaaatcacacagaatattttttaactaaa
aatgaatattattattttcgttcacttggcgaaaatgtgagaaaagatgcatcaaatatt
acagaacaattccaacaaattaaagacgatattagaataccagagtttttcccacctcag
tcattcttctccagtgtgtttcgaatagcatctgctgggatgcaactttggactcactac
gatgttatggacaacttactcatacaagtaaatggccgtaagagagttgtgttatttgca
ccttcagatgcgctgcatttgtatctccaaggtgataagtctttggtgacagatattgat
aaccctgacataaaaaagtttcctaaatttgtacaagccgtacgttttgaatgcgtttta
gaagcaggggatgttttatttattcctgctttgtggtttcataatgttgtagctcttgag
tttggggtggcagttaatgtattctggaaaaatctgcaatctgaaatgtacgataaaaaa
gatccatatggaaacaaggatctcataccagcagcacgtagcatggacattttaaacaga
gctttaaaagttctggacgaactacccgaagattataaagatttttacgccaggcgaatg
gtggcaagaatacaagaaaaatcttttaaaactgaaaagttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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