KEGG   Cryptococcus neoformans var. neoformans JEC21: CNA07190
Entry
CNA07190          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03082  ATP-dependent chromatin remodeling
cne03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CNA07190
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CNA07190
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cne01009]
    CNA07190
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNA07190
   03036 Chromosome and associated proteins [BR:cne03036]
    CNA07190
Protein phosphatases and associated proteins [BR:cne01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CNA07190
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CNA07190
    SWI/SNF complex
     CNA07190
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    CNA07190
   PBAF complex
    CNA07190
   SWI/SNF complex
    CNA07190
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 3253489
NCBI-ProteinID: XP_024512004
Position
1:complement(join(1959303..1959417,1959482..1959618,1959670..1960837,1960886..1961435,1961483..1961598,1961651..1964919))
AA seq 1784 aa
MNYQQQFLNMDSNDGQGDPGPSSMAQQNQSRFRPPFPGQPGMNAQQLAMLQQMSQAAQAQ
AGQPNQGQGRPSLTPQQIQMAMASMQAQAQAQGFNMANMNPQALIQAMRNQQLNQNQQQG
MQAGSQMGQGQGSQAQLGQQNQQQGQQPQAQNLVGSYQPGQPHPNPTQLAFQQQRIAQLM
QAQGMQARSGGPGSPIRPPQQFPQQQQPQQRAGSMPPPPVPGQQPQQQQQQNTPFPPQQP
NQQPTSQSMQLSLSPAQQQMLTQQRQNLLGNPQFQSMPPQQQHALLQQQQTQYLRMIAMQ
QAANQQQGGQHQPQGQSQPSPQQPQQHSTQGRRGSSQGVPQSPVIHRQPTPQQLGGTSQQ
PPLSGLPQHMAPPRPGSAASQRPVTPQTGQVGPGSPAIMRTPPAGGMFQQPLQHMSHSAN
APSPTLSTHSHHSQQHHTPQLQQGPIMASPMHPRMDGAGTPQPGQGQGSGMNGESQGFPT
QQGQHGQQPMAGPSGQDPNNSGTPYRSFRLPGPLDVRALPTLPTNYTPEQQQQVASALTL
MSQAVQGQGQGQGPNQVSEGQQQGQGQFSQPPQIQPSVRPGPGSVQAPGGPGPNANMPRL
PPLPLNIDTSDFPFDPRILQYLPYFGDARWRTQIQAQNPGLFAAVQHAAGLWQTIRPEVM
QRMQAALIAMKNAAFRGTQQGIPVQSGQPGQGQQGQQPLGQQQGLVQQQQQQQQKLQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQHQQQQQQQQQQHQQQQQQQQQQQQQQ
QSGQAPSTQLGPAQLAQQAWTQQQAAQAQAQMQAHAQAQAQAQARMQAQESPVPGSNMSP
LTRPPATPHVPPVPSSPVGGRPSSSSMKDIKRDRTPSGSGSAGQSSMPPPNFIPSHNGKP
VSASGGSLEQVVSATPPSATMGAASLPATAAISTHTAPAHAPTSTPAVAPAPRRQSASGP
SLPIKEWATALHLDIPVTKISPLPVNTVDEAIDPTFDGQLPPLSDKEKANIKEWLDKDVA
FVAREKARQPRVLGKMKRWAEEDDKGTEWWMLRKGEKRVMPQTKLRVLWPSDKERMRAQR
THKGRRQVKFSQADLKKMAEVEDHIVPVRLELEHEGQKLKDTFMWNCSDTVVTPELFAHI
LCDDFAVPHQHFASRIVSAIEERVREYKDQVLPLLERHPKEDCQGKLDPDGDDEARAMCE
VFRKAREGSGIEEEIKTDPGEEDGMDHIRIVTFDDQVNGIDLDDERPWTVEEAMTLVPKE
LPQDLRILIKVDIIIGTQNLTDSFEWDIHSSVTPEEFAASYVTELGLSMEFATAIAHDIR
EQILIYQRSLFLVGHTDSSSVILDDEVRGAFLPPVTTTLRKEDIAMASYTPIFNELGPDQ
LALLESQREKEMKRKKRAGRARRGIVLPEREPVKTQRTLLNNLGPNGVPILFQADNVPVR
DSAPTSRRRGAALAAEANINLLAQDLPIPASASPAPHLPHISARGKRLGRPPKNRAISPV
SIREGPLANGGTPTTGDIKGHRKGYLDDSADEQSINGALSASGRKKPGHYNRIPDSPSEP
STPLSGKVENLPSSFHLDSQTDQTSILKKRKSHNDVDERPPKSAKPDEVGVPFPISKPAS
DNKIEKKKRKSSDSSGIDSDSDSGSDSGSDDSDSTFGGRKDRKKMAAGRTETPAARSSVV
PTGTPGLASAASPGSGRKAIEVPMWIQRALGNMRAKYSRDSFLVIQKPRPADQPDAPPEW
RAKCNDCPGRIYALGPGETLNNFEVHLKNKGHIGNRLAREGKTQ
NT seq 5355 nt   +upstreamnt  +downstreamnt
atgaactatcaacagcaattcctcaacatggactccaatgatggacagggcgacccggga
ccatcttccatggctcaacagaaccagtcgcgctttcgtccaccgtttccgggccagccc
ggcatgaatgctcagcaactagccatgctccagcaaatgtctcaagctgctcaagctcag
gccgggcaaccgaatcaaggccagggtcggccgtcactcacacctcagcaaatacaaatg
gcgatggctagcatgcaggcgcaagctcaggcgcaagggttcaacatggcgaatatgaat
cctcaggcgttgatacaagcgatgagaaatcagcagctgaatcagaaccaacagcaaggg
atgcaagcgggatcgcagatgggacaggggcagggaagccaggcgcagctggggcagcaa
aatcagcagcaagggcaacaacctcaagctcaaaacttagtggggtcgtatcaacccggc
caaccgcatccaaaccctacacaactggcatttcagcaacagcggatagcccagttgatg
caagcgcaagggatgcaggctagatccggtggtccaggatcgccaatacggccgcctcaa
cagtttccccagcagcagcaacctcaacaacgtgcaggttcgatgcctcctccgcctgtt
cctgggcagcagccacaacaacagcaacagcagaacacgccatttcctcctcaacagcct
aatcagcagcccacttctcaatcgatgcaattatccctctcacctgcacagcaacaaatg
ctcacccaacaacgccaaaacctgctgggcaaccctcagtttcagtcaatgccgcctcag
cagcagcacgcgctccttcagcaacaacaaactcagtatctgagaatgattgcgatgcag
caggctgccaaccagcagcaaggtggacaacatcaaccccaaggtcagtctcagccatcc
ccacaacaacctcagcagcactccacccaaggccggcgcggttcatctcaaggtgtaccc
cagagccctgtcatccaccgccaacctacccctcaacagttagggggtacatcgcaacag
ccccctttatctggtctgcctcaacatatggcaccaccgagaccagggtcagcagcgtcc
caaagacctgtcacacctcagactggacaggttggaccagggtcaccagctataatgaga
acacctccagcaggtggaatgttccaacaaccacttcaacatatgtcccacagtgctaat
gcgccctctcccacattatctacacattcacatcatagtcaacaacaccatacaccccaa
ctgcagcagggtccgataatggcgtcacccatgcacccgaggatggacggtgcgggtacg
cctcagcctggtcagggacaagggtcagggatgaacggcgagtcacaaggctttccaacc
cagcagggtcaacatggtcagcaacccatggccggaccatcaggtcaagaccccaataat
agtgggacgccatacagatcgttcaggcttccgggcccgctggacgttcgtgctttgccg
acattgccgacgaattatacgcctgagcaacaacagcaggtggcttcagccctcactctg
atgagtcaggcggttcaagggcaaggacaggggcaagggccgaatcaagtgtctgaaggt
cagcaacaaggacaaggtcaattttctcaaccgcctcagatacaaccatcagttcgcccc
ggtcctggctcggttcaagctccgggaggtccaggtccaaatgctaacatgccccggctt
ccaccccttcccctcaatatcgacacttctgatttcccttttgacccacgtatcctccaa
tatcttccttattttggcgacgctcgctggcgtacacagatccaggcccagaacccggga
ttgtttgcggcggtgcagcatgcagcaggactgtggcagactataaggccggaggtgatg
cagaggatgcaggcggcgctgattgctatgaagaatgctgcgtttagagggacacaacaa
gggattccagtacagtctggtcaaccaggtcagggtcagcagggtcagcaaccgctggga
cagcagcaaggattggtacagcagcagcagcagcagcaacaaaaattgcaacaacaacaa
cagcaacaacagcaacaacagcaacagcaacaacaacagcaacagcaacagcaacagcaa
caacagcaacagcaacagcaacaacaacaacatcaacaacaacatcaacaacaacaacag
caacaacagcagcaacaccaacaacaacagcaacaacaacaacaacaacagcagcagcag
cagtctggacaagcaccaagtactcagttgggaccggcgcagttggcccagcaggcatgg
actcaacaacaagctgctcaagctcaggctcagatgcaagcccatgctcaagcacaggct
caagcacaagcccgaatgcaagcacaagagtctccagtgccaggaagcaacatgtcccct
ctcactcgccctcccgccacaccccatgtaccgcctgtgcccagctcccctgtcggcggc
cgaccgtccagttcaagtatgaaggatattaaacgagatcgcacgccttcaggtagtgga
tcggctggtcagtcttcaatgccgccgcccaactttataccttcacacaatggaaagcca
gtgtcagcatcgggaggatcactggagcaagtcgtcagtgctactcctcccagcgctact
atgggtgctgcctcactcccggcaacagctgctatctctactcatactgctcctgctcac
gctcctacctccacgcccgcagtggcgcccgcacccaggcggcaatccgcgtctggtccc
agtctccccatcaaagaatgggccaccgcccttcacctcgatatcccagttaccaagatc
agccctctccctgtcaacaccgttgatgaagctatcgacccaacctttgacgggcaactg
cctccgctctcagataaggagaaggccaacatcaaagaatggctcgataaggatgtggca
tttgtggcccgagaaaaggccaggcaaccgagggtgctgggaaagatgaaaaggtgggcg
gaagaggatgataagggtacagaatggtggatgttgagaaagggtgagaagagagtgatg
ccgcagacaaagttgagggtcctttggccgagcgataaggagaggatgagagcacaaaga
acgcataagggaaggaggcaggtcaaattctcccaagcggaccttaaaaagatggcagag
gtcgaggatcacattgtgcctgtcaggctggagttagagcacgaagggcaaaagttgaag
gacactttcatgtggaactgctctgatactgttgtgacccctgagctttttgcccatatc
ctttgcgacgactttgccgttccccatcaacattttgcgtcccgtatcgtctccgctatc
gaagagcgtgtccgcgagtacaaagatcaagtccttcctttgcttgagcgtcaccccaaa
gaagattgtcaaggcaagcttgatcccgatggtgacgatgaagctcgtgcgatgtgtgaa
gtcttccgcaaagctcgggaaggaagcggcattgaggaggaaatcaagaccgatccagga
gaggaggatggaatggaccacatcaggattgttacctttgatgatcaagtgaatgggatt
gatttggacgatgagcgaccatggacagtggaagaagccatgaccttggtgccaaaggag
ctgccccaggatttgaggatattgatcaaggtagacatcattattggtacccagaacttg
acggatagctttgagtgggatattcattcttcggttactccagaagagtttgcggcgtct
tatgtcactgagctgggcttgagcatggaatttgcgaccgctatcgcacacgatattcgc
gaacagatcctcatctatcaacgttccctcttccttgtcggccacactgatagctcttct
gttattcttgacgacgaagtgcgcggcgccttcctgcctcctgtcactaccactcttcgt
aaagaagacattgccatggcatcgtacacacccatcttcaatgagcttggtcctgatcag
ttagcattgctcgagtcacagcgagagaaggagatgaagcgcaagaagagagctggccgt
gctagacgcggtatcgtacttcctgaaagggagcccgttaagacccaacgcactttgctc
aataacctcggtcccaatggagttccgattctgttccaagccgataacgtccctgtccga
gactctgctcctaccagtcgaaggcgtggtgctgctctcgccgcagaggcaaacattaat
ctcctggctcaagaccttcctattcccgcatccgcgtctcctgctcctcatttacctcat
atctctgcccggggcaagcgccttggtaggccccctaagaacagagcaataagccctgtt
tctatacgagaagggcctcttgccaatggcggtacacccaccacaggcgatatcaaaggc
cataggaaaggatatctggacgactcagcggatgagcagtccatcaatggagcactgagc
gcatccgggaggaagaagcccggtcattataatagaattcccgattcaccttctgaaccc
tctactcctctctccggcaaggtggaaaatctcccgtcatcatttcatctagactcgcaa
accgatcagacttcgattctcaagaaacgcaaaagtcataatgacgttgatgaacgacca
ccgaagtctgccaagcctgatgaagtcggagtgccattcccgatttccaaacccgcttct
gacaataagatcgaaaagaagaaaaggaagagttccgattcttctggcatcgatagtgat
agtgatagtggcagcgacagcgggagtgatgactcagactcaacttttggcggaaggaaa
gataggaagaaaatggcggcgggcaggactgagacgcctgcagcaaggtcctctgtggtg
ccaactggaactccaggcttggcgtcggctgcatctcctggctcgggaaggaaagctatc
gaagttccgatgtggattcagagagctctcggtaatatgagggcaaaatattctcgagac
tcgttcttggtcatccaaaagccccggccggcggatcaaccagatgcgcctccagagtgg
agagccaaatgtaatgactgcccaggtcgaatctacgctctcggtcccggtgagactctc
aacaattttgaagtccacctcaaaaacaagggccacatcggcaataggttggcaagggaa
gggaagactcagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (74)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (88)   

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