KEGG   Chlorocebus sabaeus (green monkey): 103233159
Entry
103233159         CDS       T04361                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3b subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103233159 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csab03021]
    103233159 (SF3B3)
   03041 Spliceosome [BR:csab03041]
    103233159 (SF3B3)
   03036 Chromosome and associated proteins [BR:csab03036]
    103233159 (SF3B3)
Transcription machinery [BR:csab03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     103233159 (SF3B3)
Spliceosome [BR:csab03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103233159 (SF3B3)
 Complex B
    103233159 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    103233159 (SF3B3)
Chromosome and associated proteins [BR:csab03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     103233159 (SF3B3)
    TFTC complex
     103233159 (SF3B3)
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 103233159
NCBI-ProteinID: XP_007991866
Ensembl: ENSCSAG00000004371
UniProt: A0A0D9QWH4
Position
5:53673443..53724485
AA seq 1217 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctgtacaacttaaccttgcagagagccactggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaagaaattgttgtttcccgtgggaagatcttggagctg
cttcgcccagaccccaacactggcaaagtacataccctactcactgtggaagtattcggt
gttatccggtcactcatggcctttaggctgacaggtggcaccaaagactacattgtagtt
ggcagtgactccggtcgaattgttatcttggaataccagccatctaagaatatgtttgag
aagattcaccaagaaacctttggcaagagtggatgccgtcgcatcgttcctggccagttc
ttagctgtggatcccaaagggcgagccgttatgattagtgccattgagaaacagaaattg
gtgtatattttgaacagagatgctgcagcccgacttaccatttcatctcccctggaagcc
cacaaagcaaatactttagtgtatcatgtagttggagtagatgttggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccgacaggggaagca
gcagctaatacccagcagacacttactttctatgagctagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacacggcaacttccttattacagttccagga
gggtcagatggcccaagtggagtactgatctgctctgaaaactatattacttacaagaac
tttggtgaccagccagatatccgctgtccaattcccaggaggcggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgcaacccataagaccaaatcgatgttcttc
tttttggctcaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtaccagttgctgctgccatgtgt
gtgcttaaaacaggattcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatcagccatgcctctggaa
gaaggagacacattcttttttcagccaagaccacttaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattctgttttgccagatagctgatctggccaacgaagatact
ccacagctgtatgtggcttgtggtaggggaccccgatcatctctgagagtactaagacat
ggacttgaggtgtcagaaatggctgtttctgagctacccggtaaccccaatgctgtctgg
acagtgcgtcgacacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccaccctggtgttgtccattggagagactgtagaagaagtgactgactctgggttcctg
gggaccaccccgaccttgtcctgctccttattaggagatgatgccttggtgcaggtctat
ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagacccctgga
aagaaaacaattgtgaagtgtgcagtgaaccagcgacaagtagtgattgccctgacggga
ggagagttggtctattttgagatggatccttcaggacagctgaatgagtacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtaccccctggagagcag
cggtctcgcttcctggctgtggggcttgtggacaacactgtcagaatcatctccctggac
ccctcagactgtttgcaacctctaagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggacggagaagcaggatgagctgggtgagaggggctcgatt
ggcttcctatacctgaatattgggctacagaacggtgtgctgctgaggactgtcctggac
cctgtcactggggatttgtctgacactcgcactcggtacctggggtcccgtcctgtgaag
ctgttccgagtccgaatgcaaggccaggaggcagtattggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgcttccatctcacccccctgtcttacgagacactggaa
tttgcatcgggttttgcctcggaacagtgtcccgagggcattgtggccatctccaccaac
accctgcgcattttggcattagagaagctcggtgctgtcttcaatcaagtagccttccca
ctgcagtacacacccaggaaatttgtcatccaccctgagagtaacaaccttattatcatt
gaaacggaccacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtggaagcagcaggggaggatgagcgggagctggccgcagagatggcagca
gcattcctcaatgaaaacctccctgaatccatctttggagctcccaaggctggcaatggg
cagtgggcatctgtgatccgagtgatgaatcccattcaggggaacacactggaccttgtc
cagctggaacagaatgaggcagcttttagcgtggctgtgtgcaggttctccaacactggt
gaagactggtatgtgctggtgggtgtggccaaggacctgatactgaacccccgatctgtg
gcagggggcttcgtctatacttacaagcttgtgaacagtggggaaaaactggagtttttg
cacaagactccggtggaagaggtccctgctgccattgccccattccaagggagggtgttg
attggtgtggggaagctgttgcgtgtctatgacctgggaaagaagaagttactccgaaaa
tgcgagaataagcatattgccaattatatctctgggatccagactattggacatagggta
attgtatctgacgtccaagaaagtttcatctgggttcgctacaagcgtaatgaaaaccag
cttatcatctttgctgatgatacctaccctcgatgggtcactacagccagcctcctggac
tatgacactgttgctggggcagacaagtttggcaacatatgtgtggtgaggctcccacct
aacaccaatgatgaagtagatgaggaccctacaggaaacaaagccctgtgggaccgtggc
ttgctcaatggggcctcccagaaggcagaggtgatcatgaactaccatgtcggagagacg
gtgctgtccttacagaagactacgctgatccctggaggctcagaatcacttgtctatacc
accttgtctggaggaattggcatccttgtgccattcacgtcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctgcggtctgaacatccccctctctgtgggcgggaccac
ctcagctttcgttcctactacttccctgtgaagaatgtgattgatggagacctctgtgag
cagttcaattccatggaacccaacaaacaaaagaacgtctctgaagaactggaccgaacc
ccacccgaggtgtccaagaaactcgaggatatccggacccgctatgccttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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