KEGG   Chlorocebus sabaeus (green monkey): 103244348
Entry
103244348         CDS       T04361                                 
Symbol
YTHDC2
Name
(RefSeq) YTH domain containing 2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
csab  Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:csab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csab03041]
    103244348 (YTHDC2)
Enzymes [BR:csab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103244348 (YTHDC2)
Spliceosome [BR:csab03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    103244348 (YTHDC2)
SSDB
Motif
Pfam: YTH HA2_C Helicase_C OB_NTP_bind R3H DEAD HA2_N Ank_2 AAA_19 nSTAND3 Ank AAA_22 ATPase PhoH AAA_7 AAA_16 UvrD-helicase AAA_29 Ank_4 T2SSE SRP54 AAA_23
Other DBs
NCBI-GeneID: 103244348
NCBI-ProteinID: XP_008012356
Ensembl: ENSCSAG00000014899
UniProt: A0A0D9RQW7
Position
23:16800515..16880983
AA seq 1430 aa
MSRPSSVSPRQPAPGGVGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF
GSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQEN
TFKPESQRQRTVPNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHK
DIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNG
WMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFD
DEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFM
LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFV
TMLKMVWISKASAIQRKGRAGRCRPGICFHLFSRLRFQNMLEFQTPELLRMPLQELCLHT
KLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPH
LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMAL
LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD
VNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPA
NGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSF
RVDGIPNDSSDSEMEDKTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRA
PSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRK
SSADTEFCDECTTAERILMKSPSPALHPPQKYKDRGILHPKRGTEDRSDQSSVKSTDSSS
YPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKL
NRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLP
FQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKNTTD
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgtccaggccgagcagcgtctccccgcggcagccggcccctggcggtgtcggaggcggt
ggcccctcgccgtgtggccctgggggcggcgggcgggccaaggggctgaaggacattcgc
attgatgaggaggtgaagatcgcagtcaatatcgcgctggagcgcttccgatacggggac
cagagagagatggaatttccttcttctttgaccagtactgaaagagcctttattcatcga
ctcagtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtacagaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatccgaatttgattcttttaggcagtctttaccagtgtttgagaaacaggaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagaccacacagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtactcaaccaagacgattggcagctattgctgtggctgaaagagtt
gccgcagagagaagggaaaggattggtcaaacaattggttatcaaatccgattagaaagc
agggtttctccaaagacacttctgacattttgtactaatggggtattgcttcgtacattg
atggcaggagatagtacgttgtcgactgtgacacatgttatcgtggatgaagtgcatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcaccca
actttgaaactaattctttctagtgctgccttggatgtgaatctctttataagatatttt
ggaagttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagatattttaagaacaactggatatacaaacaaagaaatgttaaaatacaaaaaggaa
aaacagcaagaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaat
actttcaagcctgaatctcagaggcagagaactgttccaaatgtgactgacgagtatgac
ttactggatgatggtggtgatgctgtcttcagtcagctgactgaaaaagatgtgaattgc
cttgaaccatggttaataaaggaaatggatgcttgtctttctgatatatggctacataaa
gatattgatgcctttgctcaggtctttcatctcattttaactgaaaatgttagtgttgat
tacagacatagtgaaaccagtgcaacagctctgatggttgccgcaggacgtggctttgca
agtcaagtagaacagttaatcagtatgggagccaatgtccatagtaaagcatcaaatggc
tggatggcattggattgggctaaacactttgggcagactgaaattgtggatcttctagaa
tcttacagtgcttcactggaatttggaaatctggatgaaagttctctggttcaaacaaat
ggaagtgacctcagtgctgaagacagagagctcctgaaagcttatcatcatagtttcgat
gatgaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgt
gatgctggtgcagtactaatttttctgcctggatatgatgaaattgttggactgagagat
cgcatcctgtttgatgacaagcggtttgctgacagtacacatagatatcaagtttttatg
cttcattcaaacatgcaaacatctgatcaaaagaaagtgttaaaaaacccacctgcaggt
gttcgaaaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgtt
gtctttgttattgattctggtaaggtgaaagagaaatcctttgatgctctgaattttgtt
acaatgttaaaaatggtgtggatttccaaagctagtgccatacagcggaaaggcagggca
gggcgatgtagacctggaatttgttttcatctgttcagtagactccgattccagaatatg
ttggaatttcagactccagaacttttgagaatgccattacaggaactttgcttacatacc
aagctgttagccccagttaattgtcccattgctgattttcttatgaaagctcctgaacct
ccaccagctttaattgtaaggaatgctgtacaaatgcttaagacaatagatgcaatggat
acatgggaagatctgactgaacttgggtatcatttggctgacttgccagtagaaccacat
cttggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccccatccttacaatt
gcttgtacactagcttatcgagatccttttgtgctacctactcaggcctctcaaaaacgt
gcagctatgctttgtaggaaacgttttactgcgggagctttcagtgaccatatggcactt
ctcagagcattccaggcctggcaaaaagcacgaagcgatgggtgggagcgagccttttgt
gaaaagaattttctttcacaggctactatggaaataatcataggcatgagaacgcagttg
cttggtcaacttagagcatcaggttttgttagagcacgaggtggtggtgacattcgagat
gttaacacaaactctgagaattgggctgtcgttaaagctgcattggtggcaggcatgtat
cctaatttagtccatgtggacagagagaatctagtgttgacagggccaaaggagaaaaaa
gtacgatttcatcctgcttcagttctcagtcagcctcaatataaaaagattcctccagcc
aatggccaagctgcagcaattaaggcactgcccacagattggcttatttatgatgaaatg
accagagcccatagaatagctaatattagatgctgttcagcagtgacacctgtcactata
ttggtattctgtggaccagctagactggcaagtaatgctcttcaggaaccttcatccttt
agagtggatggcattcccaatgacagtagtgatagtgaaatggaggacaaaactacagct
aatttggcagccttgaaacttgatgagtggctcaatttcaaactagagccagaggcagct
agtttattgctgcagctcagacagaagtggcatagcttatttttacgccgaatgagagct
ccatctaaaccttggtctcaagttgatgaagctaccataagagcaattatagctgtttta
agcactgaagaacagtctgcaggtttacaacaaccatctgggattggtcaaaggccaagg
cctatgtcttcagaagagcttcctttggcctcttcttggaggtcaaataatagtaggaaa
agttcagcagatactgaattttgtgatgagtgtactactgcagaaagaatactgatgaaa
tctccatctccagcattacacccacctcagaagtacaaagatagaggaattttacatcct
aaacgaggcactgaggaccgatccgatcagtcttctgtgaaatctacagacagcagtagt
tacccaagtccttgtgctagtccttctcctccatcctcaggaaagggatcaaaatctcct
tcaccaagaccaaacatgcctgttcgatacttcataatgaagagtagcaatttgagaaac
cttgaaatttctcaacagaagggtatctggtctacaactcctagtaatgaacggaagcta
aatcgagccttttgggaaagcagcatggtttacttggtattttctgttcaaggatctgga
catttccagggattttctaggatgtcttctgagattggaagggaaaagagccaggactgg
ggctctgcaggactaggaggagtatttaaagtggagtggatacgaaaagaaagccttccc
tttcaatttgcacaccatttactcaatccatggaatgataacaagaaagtgcagataagc
agggatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgt
cttcccttgggagaaaaaaacacaactgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (22)   
   Pfam (22)   
All databases (39)   

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