KEGG T00147: CV

Chromobacterium violaceum: CV_2956

Entry

CV_2956           CDS       T00147

Symbol

gntR

Name

(GenBank) transcriptional regulator GntR

K06145

LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor

Organism

cvi Chromobacterium violaceum

Brite

KEGG Orthology (KO) [BR:cvi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvi03000]
    CV_2956 (gntR)
Transcription factors [BR:cvi03000]
Prokaryotic type
  Helix-turn-helix
   LacI family
    CV_2956 (gntR)

SSDB

Motif

Pfam:

Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 HTH_31 HTH_Crp_2 HTH_3 TetR_N

Other DBs

NCBI-ProteinID:

AAQ60624

LNCC_Brazil:

CV2956

UniProt:

Q7NTU7

Structure

Position

3236081..3237100

AA seq 339 aa
MSRKPRVRSGSGVTMHDVAKAAGVSAITVSRVLNQPQQVSEQLREKVMQAVDALAYVPSR
SASTLASAKSRTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLR
AYLQHRPDGVLITGLSHAEPFERILSQHALPVVYMMDLADDGRCCVGFSQEDAGAAITRH
LLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAADCRDAGLEWLDPQPSSMQMGADMLDR
ALAERPDCDALFCCNDDLAIGALARSQQLGIAVPERLAIAGFNDLQPAAWCTPPLTTVAT
PRRDIGVHAAKALLQLIDGEEPASRRADLGFRLMLRRSS

NT seq 1020 nt +upstreamnt +downstreamnt
atgtccagaaaaccgcgcgtccgctccggcagcggcgtcaccatgcacgacgtggccaag
gcggccggcgtcagcgccatcaccgtgtcccgggtgctgaaccaaccccagcaggtgtcc
gagcagctgcgcgaaaaagtgatgcaagccgtggacgcgctggcctacgtgcccagccgc
tccgccagcacgctggcctcggccaagtcgcggacggtgctggtgctgatcccctcgctg
gccaacaccgtgttcctggaaacgctgaccggcatcgaaacggtgctggacgccgccggc
taccagatgctgatcggcaacagccattacgacgcaggccaggagctgcagttgctgcgc
gcctatctgcagcaccggccggatggcgtcctgatcaccggcctcagccacgcggagccg
ttcgaacgcatcctgagccagcacgcgctgccggtggtctacatgatggacctggccgac
gacggccgctgctgcgtggggttttcgcaggaggatgccggcgccgccatcacccgccac
ctgctgtcgcgcggcaagcgccgcatcggctttctcggcgcgcagctggacgagcgggtg
atgaagcgcctggacggctaccgcgcggcgctggacgcggccgactgccgcgacgccggg
ctggaatggctggacccgcagccgtccagcatgcagatgggcgcggacatgctggaccgc
gcgctggcggagcggccggactgcgacgcgctgttctgctgcaacgacgacctggcgatc
ggcgcgctggcgcgcagccagcagctgggcatcgccgtgccggagcggctggccatcgcc
ggcttcaacgacctgcagcccgccgcatggtgcaccccgcccctgaccacggtggccacg
ccgcggcgcgacatcggcgtccacgccgccaaagcgctgttgcagctgatagatggcgag
gagccggcgtcccgccgcgccgatctgggcttccggctgatgttgcgccgcagcagctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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