KEGG   Danio rerio (zebrafish): 393902
Entry
393902            CDS       T01004                                 
Symbol
rab7a
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04137  Mitophagy - animal
dre04140  Autophagy - animal
dre04144  Endocytosis
dre04145  Phagosome
dre04148  Efferocytosis
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    393902 (rab7a)
   04145 Phagosome
    393902 (rab7a)
   04140 Autophagy - animal
    393902 (rab7a)
   04137 Mitophagy - animal
    393902 (rab7a)
   04148 Efferocytosis
    393902 (rab7a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    393902 (rab7a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    393902 (rab7a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    393902 (rab7a)
   04031 GTP-binding proteins [BR:dre04031]
    393902 (rab7a)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    393902 (rab7a)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   393902 (rab7a)
  Exosomal proteins of other body fluids (saliva and urine)
   393902 (rab7a)
  Exosomal proteins of colorectal cancer cells
   393902 (rab7a)
  Exosomal proteins of bladder cancer cells
   393902 (rab7a)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    393902 (rab7a)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_7 NTPase_1 AAA_24 AAA_22 AAA_16 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ATP-synt_ab
Other DBs
NCBI-GeneID: 393902
NCBI-ProteinID: NP_957222
ZFIN: ZDB-GENE-040426-1352
Ensembl: ENSDARG00000020497
UniProt: Q7T2C6
Position
11:complement(16179089..16215143)
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSAETCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatcaaggaagaaagttcttctgaaggtgatcattcttggagattccggggttgga
aaaacatctctaatgaaccagtatgtgaataaaaagttcagtaatcagtataaagccact
ataggagcagatttcctgacaaaagaagtgatggttgacgaccggcttgtcacaatgcag
atatgggacacagcaggtcaggagcggtttcagtctctgggtgttgctttctatcgtggt
gctgactgctgcgtcctggtgtttgacgtcactgccccgaacaccttcaagacactggac
agctggagggatgagtttctgatccaggccagtcctcgagacccagaaaacttccctttc
gtggtgctgggcaacaaaatcgatctggagaatagacaggtaacaactaagcgagcacaa
gcttggtgtcagagtaagaacaacatcccatattttgagaccagtgcaaaggaggccatc
aacgtagagcaggcattccagaccatcgcacgcaatgcactcaaacaggaaactgaagtg
gagttatacaacgagttccccgagccaattaaactagaccggaacgatagagccaaacca
tcagcagagacctgtagctgctga

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