KEGG   Danio rerio (zebrafish): 393945
Entry
393945            CDS       T01004                                 
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
  KO
K07887  Ras-related protein Rab-5A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04137  Mitophagy - animal
dre04144  Endocytosis
dre04145  Phagosome
dre04148  Efferocytosis
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    393945 (rab5ab)
   04145 Phagosome
    393945 (rab5ab)
   04137 Mitophagy - animal
    393945 (rab5ab)
   04148 Efferocytosis
    393945 (rab5ab)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    393945 (rab5ab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    393945 (rab5ab)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    393945 (rab5ab)
   04031 GTP-binding proteins [BR:dre04031]
    393945 (rab5ab)
Membrane trafficking [BR:dre04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    393945 (rab5ab)
 Endosome - Lysosome transport
    393945 (rab5ab)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   393945 (rab5ab)
  Exosomal proteins of other body fluids (saliva and urine)
   393945 (rab5ab)
  Exosomal proteins of colorectal cancer cells
   393945 (rab5ab)
  Exosomal proteins of bladder cancer cells
   393945 (rab5ab)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    393945 (rab5ab)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 393945
NCBI-ProteinID: NP_957264
ZFIN: ZDB-GENE-040122-3
Ensembl: ENSDARG00000007257
UniProt: Q7ZUG4
Position
16:49647436..49661406
AA seq 216 aa
MAGRGGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAK
KLPKNEPQPAGANTARNRGVDLTETAQPAKGPCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggaagaggtggagcaacgagacctaacgggccgaacaccggcaacaaaatctgt
cagttcaaattagtgctgctgggagagtctgctgtggggaagtcgagtctagtgctgcgc
tttgtaaaaggacagtttcatgagtttcaggaaagcacaataggagccgccttcttgact
caaacattatgtctggatgacacaacggtgaagtttgagatctgggatacagctggccag
gagcgctaccacagtctggccccaatgtattacagaggagcacaggcggccatagtggtg
tatgacatcacaaatgaagaatcatttgcacgtgcgaaaaactgggtgaaagagcttcaa
agacaagccagtccaaatattgtaatagctttggctgggaacaaggcagaccttgccaac
aagagagcgttggactttcaggatgcgcaatcatatgcagatgacaacagtttgctcttt
atggaaacgtcggcaaagacttcaatgaacgtcagtgagatttttatggcgatcgcaaag
aagctcccgaagaacgagccccagcccgcaggtgccaacacagcccgcaacagaggagtg
gatctaacagaaacagcacagcccgccaaaggcccctgctgtagcacctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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