KEGG   Danio rerio (zebrafish): 394053
Entry
394053            CDS       T01004                                 
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
dre03015  mRNA surveillance pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    394053 (eif4a3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    394053 (eif4a3)
   03015 mRNA surveillance pathway
    394053 (eif4a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    394053 (eif4a3)
   03041 Spliceosome [BR:dre03041]
    394053 (eif4a3)
   03009 Ribosome biogenesis [BR:dre03009]
    394053 (eif4a3)
   03012 Translation factors [BR:dre03012]
    394053 (eif4a3)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     394053 (eif4a3)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     394053 (eif4a3)
   mRNA cycle factors
    Stress granule specific factors
     394053 (eif4a3)
Spliceosome [BR:dre03041]
 Complex C
  Other components
   EJC/TREX
    394053 (eif4a3)
Ribosome biogenesis [BR:dre03009]
 Eukaryotic type
  90S particles
   Helicases
    394053 (eif4a3)
Translation factors [BR:dre03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    394053 (eif4a3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD TniB
Other DBs
NCBI-GeneID: 394053
NCBI-ProteinID: NP_957372
ZFIN: ZDB-GENE-040426-915
Ensembl: ENSDARG00000102978
UniProt: Q7ZVA6 B2GTC1
Position
11:complement(44880191..44897708)
AA seq 406 aa
MATAVVPVRKRILKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggccaccgccgtcgttcccgtgaggaagaggatcctgaaggaggaagacatgacgaag
attgagtttgagacgagtgaagaagtggacgtgacgccgacgtttgacacgatgggcctg
agggaggatttactgcgcgggatctacgcatacggttttgagaagccatcggccatccag
cagagagccatcaaacagatcatcaagggcagagacgtcatcgcacagtcacagtctgga
actggtaaaacagccaccttctgtgtctcagtgctgcagtgtctggatatacaggtacga
gagactcaagcgttgattttggctccaaccagagagttagcaggacagatccagaaggtt
cttctggctctgggcgactacatgaacgttcagtgtcacgcgtgtatcggcggcacaaat
gtcggtgaagacatccggaagctggattacggtcagcacgtggtggcaggaacgcctgga
cgagtgttcgacatgatccgcaggaggagtttaaggactcgcgccatcaagatgctggtg
ttggatgaagccgatgagatgctcaacaagggttttaaggaacagatttacgacgtgtac
cgatacctgccaccagccactcaggtgtgtctgatcagcgccacactgccacacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctggagggcattaagcagttcttcgtggccgtggagcgagaggagtggaagttc
gacactctgtgtgatctgtacgacacgctgaccatcacacaggccgtcatcttctgcaac
accaaacgcaaggtggactggctgacagagaaaatgagggaggcaaatttcaccgtatcc
tcgatgcacggagacatgcctcagaaagagcgagagtccattatgaaggagttcagatct
ggagccagtcgagtgttgatctccacagacgtttgggccagaggtctggatgtgtcgcag
gtttccctcatcattaactacgatcttcccaacaacagagagctgtacatccacaggatt
ggtcgatcgggtcgttacggcaggaagggtgtggccatcaactttgtgaagaatgacgac
atccgtatcctgcgtgatatcgagcagtactactccacacagatcgatgaaatgcccatg
aacgtggctgatctgatctga

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