KEGG   Danio rerio (zebrafish): 394117
Entry
394117            CDS       T01004                                 
Symbol
rab1ba
Name
(RefSeq) zRAB1B, member RAS oncogene family a
  KO
K07875  Ras-related protein Rab-1B
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    394117 (rab1ba)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    394117 (rab1ba)
   04031 GTP-binding proteins [BR:dre04031]
    394117 (rab1ba)
Membrane trafficking [BR:dre04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    394117 (rab1ba)
 Autophagy
  Other autophagy associated proteins
    394117 (rab1ba)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   394117 (rab1ba)
  Exosomal proteins of other body fluids (saliva and urine)
   394117 (rab1ba)
  Exosomal proteins of colorectal cancer cells
   394117 (rab1ba)
  Exosomal proteins of bladder cancer cells
   394117 (rab1ba)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    394117 (rab1ba)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB AAA FeoB_N AAA_7 PduV-EutP ABC_tran AAA_16 AAA_29 Septin AAA_22 LANC_like AAA_5 CRAL_TRIO_2 TniB
Other DBs
NCBI-GeneID: 394117
NCBI-ProteinID: NP_957436
ZFIN: ZDB-GENE-040426-873
Ensembl: ENSDARG00000058044
UniProt: Q7ZUV5
Position
7:18100996..18116394
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATTG
GDKPNLKIESTPVRQSGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactacctgttcaagttgctcctcatcggtgactctggagtggga
aagtcgtgtctgttgttgagatttgctgatgacacatacactgagagctatatcagcacc
atcggcgtggacttcaagatccgcaccattgaacttgatggcaaaaccattaagctacag
atatgggatactgcagggcaagaaagatttcgaactatcacctccagttactatcgaggg
gctcatggaatcattgtggtctatgatgtgacggatcaggaatcgtataacaatgttaaa
cagtggcttcaggaaatagaccgctacgcaagcgagaatgtcaacaagctgctggtgggg
aacaaatgcgacctcaccaccaagaaagtagtggactacacaacagccaaggaatttgct
gactctttagcaattcccttccttgagacgagcgctaagaatgccacaaatgtggagcag
gccttcatgactatggctgctgagatcaagaagcgtatgggccctggagcgacaaccgga
ggagacaagcccaacctgaagatcgagagcactcctgtgcggcagtctggcggaggctgc
tgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (21)   
   Pfam (21)   
All databases (84)   

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